| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39159 |
|---|
| Symbol | |
|---|
| ID | 7194843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011686 |
|---|
| Strand | - |
|---|
| Start bp | 467561 |
|---|
| End bp | 468607 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183228 |
|---|
| Protein GI | 219125942 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0132421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAT CCCGGTCTGT TGCGAATGTA CATGGCTCGG TCCCTTATCG CCAGCTCGGC
GCAGCTGTCT TGTTGGTGTT GCTTTCACTG TCAGTGACGG TGATGTTCCA ACGGTTCGCT
CTTCGAAACG ATCGGCAGGC CGCAACCGTC AAGGGGCCGC ATCTTAGCAA TGATACGGCA
ATTCGGCCAA GGATCATCAG GACGACCCCT GTTGAGCTTT TGAAAAATCG CACTCTTGTG
GTTTTGATTG GGGACTTGAG ATGCGGCGAA AAAGCCTGGG AATCGCTGTA CACCAACGTT
CTTGACCACA ATCAGGCTGA TCTGGCACTC TTCACGCAGC CACCTTCGCA AGACGAGTAC
AAAAACTCCT CCCTTTTCGA ACGTGCCATG CACGTGGAAA TGATTCCCAA CTACACTGAT
TGGTCGGACG CCTTGGATCT CGTAGCTGGG CCAGCTTGGC GGAGAACGGT ACCGCGGTCT
CACCCATCTC AGTCACACTC CATGGTGCTC GGTGGCGTTC CTGGATACAC GGCCAGCGGC
GCCGTTGTCA ACATGTTCAA GTGGTTTGTG TCCCAGCGTA TTGAGGAGAA CAATTGGTTG
TCAAAGTACG ATCGCTACGT TGTCACACGA ACCGATCAAT ACTACTCTTG TCCTTTGGAT
ATTGCTAGTC TGGATCCGCA ATATCTCTGG GTTCCAACAG GGCAAGATTA TAGGGGCGTT
AACGATCGAC TCCTGATTGC TAGTAAAGAG TTTGTGGTTT CAGCCTTAAG CACGTTGGTC
CCTTTTCTGA AAGATCCATG GCGATATGCG TTTATGCCGG CTAATACAAA TTGCGAAAGG
TTTTTATTCT ATATGTGGAT CGATTCGGGT ATGGCGCAGA TTCTTCGTCG CTTTCCCCGC
AGTATGTTCA CCTGTATGGC GCCAACCGAC ACTTCAAGTT GGGGCAAGAT AAGCGGTTAC
GACGAAGGCG CCGATCTGCA TTTGAAATAT CCCATGGAAT TTAATTTCAC AAAGAAGAGG
TGCAGATTAG ATAGTCGACG ATGGTGA
|
|---|
| Protein sequence | MAKSRSVANV HGSVPYRQLG AAVLLVLLSL SVTVMFQRFA LRNDRQAATV KGPHLSNDTA
IRPRIIRTTP VELLKNRTLV VLIGDLRCGE KAWESLYTNV LDHNQADLAL FTQPPSQDEY
KNSSLFERAM HVEMIPNYTD WSDALDLVAG PAWRRTVPRS HPSQSHSMVL GGVPGYTASG
AVVNMFKWFV SQRIEENNWL SKYDRYVVTR TDQYYSCPLD IASLDPQYLW VPTGQDYRGV
NDRLLIASKE FVVSALSTLV PFLKDPWRYA FMPANTNCER FLFYMWIDSG MAQILRRFPR
SMFTCMAPTD TSSWGKISGY DEGADLHLKY PMEFNFTKKR CRLDSRRW
|
|---|
| |