Gene PHATRDRAFT_39118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39118 
Symbol 
ID7194823 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp373349 
End bp374576 
Gene Length1228 bp 
Protein Length396 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183084 
Protein GI219125641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA ACAATGGACA CGCAGCTCGT CGCGCGCTAA GTCGAAGAGT CGGTATCGTC 
TTGGTTTCTT TTGCCGTTCT ATTGGCAATA TTATTGGCCG TCAAGTCTCA CGTTCGACAC
AAAAAGCCAT TCTCACTGTC AACAAGACCA CATCAACCTT CTCGTTGGGG AACGCGAGGG
CGAGGAGGAT CAATGGCGTA TCTGAGCGAA GCAGAGGTTC TGGAAGATAT ATTACTCGCC
AAACTGCACC TAGTGGATAT CCGGGTCGAA GACGCCGACG CTTTGCAAAA GGCCAGTAAG
GCCTCAGTAA CAGCCGATAG CAACACTTCT TACGATCACG AGTCCGCTAC TCCATACGCG
GGTATAACCG GTTTCTTTTG CACCCTAGAC TGGTCCGTGC ACAAGCTGGA TCCGGCCAGC
ACCCCAATGT TTCGGGACTT GACAGCCAAA AGCGCTTCCT GTGACGGTCC TCGAAAAATG
GACCTTGGGA AAGTAGTCCA GGCTGCGCGG GAACGAGATA GCGACATCAA CCCTCGTCGC
GTCAGTAGCG TCCACGTTCT GAACTTAGCG GCCGTTGTTT TCCACGAATC GCGATGTGGG
AGCACGTTGG TAGCAAATAT TCTGGCCGGT ATGAATCCTG CGGCCCACCG GGTGTACTCG
GAATCGCCAC CGCCACTACA CGCTCTCAAA ACAGTCTGTG GCGAGGACTA TTCCCACTGT
GCGAAAACAA TATCTGCACG TATATTACGT GATGTCGTCT ATCTCATGAG TCGCTCCAAC
GACTTGAAGG AAACACGGGT CTTTTTCAAA GTTCAATCCC TCGGAAGTCG CAATATTGAG
GTGTTCCAAC AAGCCTTCCC CGCCACTCCC TGGTTGTTTG TGTACCGCGA CCCTGTTGAA
ATACTTATGA GTCAGCTAGC CAACGGACCG CGTAATGCTA ACTGCGTCCG TCCTCAACGA
CTGCATACAC AGCCGACCAG CGTACATCGT GTTTGGCAAC ACCGTGGAAG TAGCGCGACA
ACAAACTTGA AAACGCTGTC ACCGGAAGAG TACTGTGCCG TACACTTGGC GACTATCACG
GAAACAGCCG TTGAGCAGCT ACAATATGGT TCACAGCTGC AAGGAGTTCC TATTAATTAC
GCTTCCCTCA AACCGATGCT GCTTAAAGTG CTGCCCACCC GACTTAATGT GACAATGGGA
CCAGAGGAGG TGCGCCGTAT TGACTTAG
 
Protein sequence
MKENNGHAAR RALSRRVGIV LVSFAVLLAI LLAVKSHVRH KKPFSLSTRP HQPSRWGTRG 
RGGSMAYLSE AEVLEDILLA KLHLVDIRVE DADALQKASK ASVTADSNTS YDHESATPYA
GITGFFCTLD WSVHKLDPAS TPMFRDLTAK SASCDGPRKM DLGKVVQAAR ERDSDINPRR
VSSVHVLNLA AVVFHESRCG STLVANILAG MNPAAHRVYS ESPPPLHALK TVCGEDYSHC
AKTISARILR DVVYLMSRSN DLKETRVFFK VQSLGSRNIE VFQQAFPATP WLFVYRDPVE
ILMSQLANGP RNANCVRPQR LHTQPTSVHR VWQHRGSSAT TNLKTLSPEE YCAVHLATIT
ETAVEQLQYG SQLQGVPINY ASLKPMLLKR RCAVLT