Gene PHATRDRAFT_39117 details

Gene Information

• Locus tag: PHATRDRAFT_39117
• ID: 7194877
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: +
• Start bp: 370582
• End bp: 372582
• Gene Length: 2001 bp
• Protein Length: 587 aa
• GC content: 45%
• Product: predicted protein
• Protein accession: XP_002183083
• Protein GI: 219125639

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.294419
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGATTTC CTTGTTTGCT CCTTGTTGTT TCGGCTGTAT TGTCTCTAAG CAAGGCGGAA 
GAACAACAGA AAAGTAACGG TACAAGGCGG ACCCGTCAGT TAAAACTCAG CGAAGCAGAA 
TCATTTCTTC ATGCTGAACA GTTACTGTGG TCGGGATCGG GACGACATAC CCAAGAGGAT 
GCTTTTCTCA GCTTTGAAAC CTCTTCCCCG ACTCCAATCA CTTCAGTCTC GTTTACTGAT 
TTTCCATCCA TAGCTCCGGT CGCTAATTCT GCGCCGACTG TTTCATCATC TAAATATCCC 
ACTCAGGTTC CGATCCGATC GACTGATCCA TATCCCGGAA CGTCTGCCAC AGAGCAACCG 
ACAAACTTTA TCTGCGACGG TTTTAATCGT TCAGATATTC TTCTCGGACT TTTGCAATCA 
GTAACTTCAG AGGATCTTTT GCTAAACAGA TCCCTGCCTC AAGGCCAAGC CTTTTTGTGG 
CTACTCGACA CTGATATTAC AACAGACCCT TGCATATACC CATCTGTTAA GCAACGATAC 
TCTGTTGCAG TGATCTATTT TGCATTAGGA GGCAACAATG GGGCGAGTTG GATTGAAAGT 
ACGGGCTGGT TGTCGTCCAT GGAGGAATGC GACTGGGCAC GCGTGAACTG TGACGAAAAA 
GGCGGAGTCA CTGGCCTCCA ACTAGGTAGG TACTCAAACT AGAAGGAATG CCGTCTTAGC 
AGATTCAAAC TGATGCTTGG AAACTGTACT GAACAGGTAG AAACAACCTC ACGGGGATGA 
TTCCGAAAGA AATTTCAGAA TTGACTGCGT TGCAGGCGTT AGTTATGAAC GACAACACCA 
TAGAGGGTCC GCTTCCAGAG ACCATTGGCA GTTTACGTAA TCTGACAGAT CTAGACCTGG 
AAGACAATTT TCTAGAAGGT AACCCTTTGC TCACGCTATC TTCACTCAAG AAGCTACGCA 
GTCTTCGATT ATCATTCAAC TCTTTCGATG GTTCGGTACC TTCATCAATT GGTGGCTGGA 
ATGAGCTGCA GGAGATGTGG ATGGCTGGCA ACTTTTTCAG AGGAGAACTT CCTACGGAAA 
TCGGCTTGAT TGGGAATCAA TTATGTAGGT CGTTGCTTCG TCCGGTTTTA AAAATTATCC 
TTCCCTTGGA AACCTCACAT TTTGTCTTGA TGTCGATTTA GCATCCCTCT TTATTTACGA 
AAACGAATTG GAGGGTACGC TCCCGTCCGA GCTCGGCAAC TTGGGACTTT CTGAATTCCT 
GGGTCAGGCA AATATGTTCG AAGGCAGTAT TCCCCAGGAG CTGTTTAGAA ACTTTGATCT 
TGTGGTACTA CGACTTGACC AAAACAAGCT TACGGGAACT GTGAGCAACG CGATTGGTGG 
TTTGAACAAC CTCCAAGATC TACGTTTAAA CCTTAACTCA TTGTCTGGAA ATCTTCCAAT 
ATTGCTCTAT GGGCTGAGCA ATATACGTAA GTTCTTCCAG GCCGCCGTCA AAGGCGGCCC 
GGATTATTCC AAATCTTCTC TCCTTTTGTA ATCCTCACTC TCCTACCTAC CCCAGAAAAT 
CTGCTTTTGA GCAACAATCG CTTCGATGGA CAGATTCGCA ATGCGTTCGG AAACTGGAAT 
GCTTTGGATT TCGCAGATTT TGCACAGAAT AGGTTCACAG GGTTTATCCC ACCAAGCTTA 
TTCGAAGCCG AATCGCTTCG AATTCTATAC CTTAACAACA ACCTGCTGCA AGGACCAATC 
CCCTTAAATT TCGGCAAACC TCGAAAGCTC CGTGATCTTT ATTTGAACAG CAATATTTTG 
ACCGGAGAGA TTCCTTCAAT CCCTACAGGA AGTTTGTTGA ACTTATCTGA GTTTCTTTTG 
CAAGACAACC AACTCCAAGG CATCACAATG CCTCCTTCTG TTTGTTCTTT GATCGAGCAA 
GATGGCGAAC TAGAGGATCT GTGGGCTGAC TGCCTTGATA CTGATGATGT TGATTGTCAA 
TGTTGTACCC AATGCTTTTA A 

 

Protein sequence

MRFPCLLLVV SAVLSLSKAE EQQKSNGTRR TRQLKLSEAE SFLHAEQLLW SGSGRHTQED 
AFLSFETSSP TPITSVSFTD FPSIAPVANS APTVSSSKYP TQVPIRSTDP YPGTSATEQP 
TNFICDGFNR SDILLGLLQS VTSEDLLLNR SLPQGQAFLW LLDTDITTDP CIYPSVKQRY 
SVAVIYFALG GNNGASWIES TGWLSSMEEC DWARVNCDEK GGVTGLQLGR NNLTGMIPKE 
ISELTALQAL VMNDNTIEGP LPETIGSLRN LTDLDLEDNF LEGNPLLTLS SLKKLRSLRL 
SFNSFDGSVP SSIGGWNELQ EMWMAGNFFR GELPTEIGLI GNQLSSLFIY ENELEGTLPS 
ELGNLGLSEF LGQANMFEGS IPQELFRNFD LVVLRLDQNK LTGTVSNAIG GLNNLQDLRL 
NLNSLSGNLP ILLYGLSNIQ NLLLSNNRFD GQIRNAFGNW NALDFADFAQ NRFTGFIPPS 
LFEAESLRIL YLNNNLLQGP IPLNFGKPRK LRDLYLNSNI LTGEIPSIPT GSLLNLSEFL 
LQDNQLQGIT MPPSVCSLIE QDGELEDLWA DCLDTDDVDC QCCTQCF