Gene PHATRDRAFT_39109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39109 
Symbol 
ID7194818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand- 
Start bp351337 
End bp351894 
Gene Length558 bp 
Protein Length185 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183210 
Protein GI219125904 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.766207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC GAAGGCAGAG CCTTGTTGGG CGGGCGAAAG ATCCGATATC ATTTGGTCTC 
CGCTTGAAGT TCATCGATCT CCCACTGAGC CACGCAGCAG ACGATGAGGC CGATTCCGCT 
CAGCCCGAAA CGGTTCCGTG GCCATGCCTC GCATTCACCA GCATTCACGA ACTCCTGGGA 
ATATTGTCTG TAGAAAACGA TGGCGACTAC ATTTCTTGCA CTCGCCGACA GCACCGGCTG 
ACGGTCGAGC TTTTGCGGCA TATATACGAA CGTGGGGGCA GCTATACCGA CCCCGTTTAT 
TTTTTATTCG GCTCGCGAAC GCCTGGAGGC AACCGACTCT TCTTTGCAGA CGTGAACAAT 
TGTTGCTTTC GTGGGCGACG TTTGGTAGCC AATGACTACC GATCACACAT TACAACGGCG 
GTGGATTGTA TGGAGCAAGA AGCAGCATTT CTGGACGCCT TAAACGAAAC GGCTCCAATT 
TTGACAAACC TCTTGGCAGA AGAAGCCCTA CGCCAAGACT ATTTACCAGG GCCAGGCGAA 
CACGCGCCCG CAGCCTGA
 
Protein sequence
MNKRRQSLVG RAKDPISFGL RLKFIDLPLS HAADDEADSA QPETVPWPCL AFTSIHELLG 
ILSVENDGDY ISCTRRQHRL TVELLRHIYE RGGSYTDPVY FLFGSRTPGG NRLFFADVNN 
CCFRGRRLVA NDYRSHITTA VDCMEQEAAF LDALNETAPI LTNLLAEEAL RQDYLPGPGE 
HAPAA