Gene PHATRDRAFT_39098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39098 
Symbol 
ID7194813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp325719 
End bp326699 
Gene Length981 bp 
Protein Length326 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183074 
Protein GI219125621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.186193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCCCT CGCAAAACAG TATGAGTGGC TCAGACAAGA TTGGTCCCCC TATCAGTGTT 
GTAGCTTATG GGGATATGTC ATTGAAAAAG CGTCCGAAGG TCCATGGTAG CTCGTGCAAA
GGAAAAAGTA AGAGATTCTT GATCACGCCG ACAGCTAGCG GGATCCATGG CTCATTGAGT
AGCTATGATA GACAGCAGCT CGTACTGCAA CCCATAGAAG AGAGCAATGC CTTCACAGTC
CTCATCGGTA CTGTAACAGC AAATGCCAGA AGCTATCCAG GCGTAACTGA AGAACCGAAG
TCAAGTGAAC GAAGTAACCT TAGCTCCACA ACGGCTATGT CAACCGCTAG CACAGGTGGA
GACCAAGAAA AGTCTACCAA GAATAGCGAT TTGAACAAAA AGGGTCGGAA TTTCTGCGAC
CAATTAGTTG CCATGCGCTG TTCTGTAGAA AGAGCGAGTT GCTCCAATAA CGCAGTCAGC
ATTCGCAGTC CCGTGTCGCT TCATTTCAAG CGGACGACCA CTGGTGTTGG AGAAGAGATA
CAACGCACGC CCACAAGACC AACTATTACC ACGGCGATAA TCCGCCAATC AAGCAAGGCG
GAAATTCTCC AGGCGACAGT TCCAACGACA ATAGACTGTA TTACGAAGGC ACCTTCCACT
AGCACCGACT TCGAACTTTC GTCCTGGGAC AAGATGTTTT TACTACATGT TTCGGGAAGC
CACGGCTTGG CGTCCTCCTC CTCAGCAATT CAACCTGCGT TGGCGGATGC GAGAATACAG
CAAAGAAACT ACTGTCATAA CTTCCGGAAG TATCAGGCGC GTAGCGAGGC AACACACGTT
AAATTTGGGG CCTGGATGGA CGAACAACGT GCACTCCTGG CTCAGTTAGA AACGATTCGA
CCTACCTACG AAACTAATTT TCAAGTTTTA CAGGCGAGAA CGAGGCTCAA CTTGCTAGCC
TTGTGTGGCA TTCAACTTTG A
 
Protein sequence
MLPSQNSMSG SDKIGPPISV VAYGDMSLKK RPKVHGSSCK GKSKRFLITP TASGIHGSLS 
SYDRQQLVLQ PIEESNAFTV LIGTVTANAR SYPGVTEEPK SSERSNLSST TAMSTASTGG
DQEKSTKNSD LNKKGRNFCD QLVAMRCSVE RASCSNNAVS IRSPVSLHFK RTTTGVGEEI
QRTPTRPTIT TAIIRQSSKA EILQATVPTT IDCITKAPST STDFELSSWD KMFLLHVSGS
HGLASSSSAI QPALADARIQ QRNYCHNFRK YQARSEATHV KFGAWMDEQR ALLAQLETIR
PTYETNFQVL QARTRLNLLA LCGIQL