| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39062 |
|---|
| Symbol | |
|---|
| ID | 7194795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011686 |
|---|
| Strand | - |
|---|
| Start bp | 235641 |
|---|
| End bp | 236456 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183186 |
|---|
| Protein GI | 219125854 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.100965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCATC GAGATGAAGC GGTTGCGTTG CTGAAAGCGA TGGGCTTTGA ACACAGTGCG
GCTCGAGCTG CACTTGAATG GTGCAGCGGA AACGTTGAAG CTTCCGCAAA TTTTCTTTTG
AATGGGCATC CCAGCTTTGC TGCTTCGGGG ACATCAGGAA GTTTTGAAGC TGTGTCTTCC
GCGGAAGTTA GAAACATCCA TTGTCCTCTG AGTCAGTACA GCTTGGAGGC GGGTCAGTCG
TCTTGCACAT GCATAGCGAT GACCAACGCC TTGCACTTTT TGCGCTCCTC AAACCACATT
TCTGATTTGT CTCCTGAATT TCTACAGTGT GCTCTTCTCG CAGGAAATCA AACCTATCTA
AAGATCGCAC GGAATCGAAC GGTCGAACAC ATGTCGGCCG AAGAAGCTCT AGATTCAGGG
GAGTTTCAGT GTCTCGAGCT CATAGGGAGC GTGCGCCAAG GAATTATATC TCGAGATGAT
CAGCATCCGT TAGGTTTTGC AGTGCAGCTT CAGGAGTGTA AATCTGAGCG ATTTTGGACA
TGTGTTCTGA TCACAAAAAC ACCTGAGTCC GTCGTGATAT GTTTGCCACC CAGCAGTGAA
ACTGAGTACG TTTTAATCGA CTCCCATCCG CGGTCTCATC TGTTTGGTAC CGAAGGAAGC
TACGCTCGAA TTCATTTCAG TCTCTCGGCT TTGGTGGACA GTCTGAAGCA AATATTCCCG
ATGACCGATC TAGGCAGTGA TGTGCCCGAG CTCATGGCTG CCATGTACAA CTCGTTTGAT
TTGTACGCGT TTCAATACAA ACAAATCTTA GCTTGA
|
|---|
| Protein sequence | MEHRDEAVAL LKAMGFEHSA ARAALEWCSG NVEASANFLL NGHPSFAASG TSGSFEAVSS
AEVRNIHCPL SQYSLEAGQS SCTCIAMTNA LHFLRSSNHI SDLSPEFLQC ALLAGNQTYL
KIARNRTVEH MSAEEALDSG EFQCLELIGS VRQGIISRDD QHPLGFAVQL QECKSERFWT
CVLITKTPES VVICLPPSSE TEYVLIDSHP RSHLFGTEGS YARIHFSLSA LVDSLKQIFP
MTDLGSDVPE LMAAMYNSFD LYAFQYKQIL A
|
|---|
| |