Gene PHATRDRAFT_39057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39057 
Symbol 
ID7194732 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp230952 
End bp231420 
Gene Length469 bp 
Protein Length124 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183053 
Protein GI219125577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000879672 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGCTC AAGCTAGAGT TTTTTCAGGC TACCGCCGCT TATTCCGTGC CCGCAGGAAC 
TTATTTGAGG GCGATGTGCA GGCAATGAAG GAGTCTCGTG TTGCTATTAA GCAGGAATTT
GTGAAAAACA GAGGTGCTGT GATAGCTGGA GAGCAATTTG AGGGCCTATT GACCATGGTG
GACGAGGCTG AAGACATGCT GCGACACGGT ATAGCCCGAG GCAATCTCAA CCCTGGTACA
GGAAACTATG GTACGTGTAA AAGGCTGGCG GCAAGTCGTG CAACGCCGTC CCCCAGTCTT
TTTTGGTTCT CACGTTTCCC AACATTTGTT GTAATATCTG ACAGAAATTA AAATCAAACC
TGAACATGTT GAGGGCGTAG AGCATTCCAA TATGGAACCA ATAACTGCGG ACGTTGTATC
GAAAATGGAA AGACCAATGG TAGAGACAAC TTGCCAATCG AAGAAATAA
 
Protein sequence
MSAQARVFSG YRRLFRARRN LFEGDVQAMK ESRVAIKQEF VKNRGAVIAG EQFEGLLTMV 
DEAEDMLRHG IARGNLNPGT GNYEIKIKPE HVEGVEHSNM EPITADVVSK MERPMVETTC
QSKK