Gene PHATRDRAFT_39052 details

Gene Information

• Locus tag: PHATRDRAFT_39052
• ID: 7194729
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: +
• Start bp: 219154
• End bp: 221511
• Gene Length: 2358 bp
• Protein Length: 481 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002183051
• Protein GI: 219125573

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCCGA GATGGGACAA AGGGATCTGT CTTGCAGCCT GCTTGATTGG CTTGCTACAA 
TCTCTCCCGC GACTTGCCTA CGGATTCTAC ACGGAGTCGC TTCCGCCTCG ATACCAGCAC 
TCGCCATCAA AGCGACCCAC AGAACAACCG CTGCGTATAC GGCGGCGATC ATCAAATGCG 
CTCAACGACA GAATTAATAG ATTTACTGCC CCTGGCACGG CTATCGGGAT TGCCGTAGAG 
CCAACCCGAG ATGATGCTCC CAAGGCAACC TACAAACGCA ACAGCTCACG GAAAGGAGAC 
CGATTCGCAC AAACGTCACT TGCGCGAAAT CGGAAACGCA CGACCCTGCA AAAGACTCCC 
GAGCAGATCG AAACTCAATT ACAGTGCGCG TTACAGCAGT TGCGAATCTT CAGCCAAAGT 
TTGCCGGATC GGGATGCTCC CATCGACATG TTATTGTTTC CAACCGTGCG TGAGTGCAAC 
GCAGCTTTGG CGGCCTTCGG CGACGCCCGG GAGCTCTTAA GGGCTCTCCG TTTATTTGGT 
AAAATGCGTA AAGCCACTGC TTTACAGGAA CATCTGCGGG AGCGGATTAA CTTTGCCTGG 
CCCGTTCCGG TTCCCACGCT GGTCACCTAT TCGACACTCA TGTCGCGCGC CGTCAAAGCG 
CAAAAACCAC GCGTTGCCCT GCGCATGTGG AATCTCAAAG GCACGGACAT TGTTCCAGAC 
GTTAAGGCTG CCAACATTCT CATGAATTGC TTCGCCAAAC TTGCCGATGT CGACAAAGCC 
CAAGATTTGT TGTCTCAGAT GAAATCCGGT GAGGGTCGTA TAGTCCCACG CATGACGCCC 
AACTTGGTTA CGTACAACAC TCTTTTACAC GCGTGTCAAA AGGCAGGAGC CTTGGACGCC 
GCTCTGGTTG CCAAGGCCGC GTTGGACGAA TCGGGGTTAA TACCGGACGC CCGTACGTAC 
ACGTCGCTGA TCGCCACCGT CGCCCGCAAC CCAGCGCAAT TCTACGGACA AAACGATCCG 
AGTTTGGCCT TTGCATGGCT CCAAGAAATG ACGGACCGCA ACGTGCGTCC AAACGGTATG 
ACGTATTCTG CATTGATTGA CGTGTGTGGA AGGTGTCACC GGAGTGACTT GGCACTGCAG 
GGATTGCGGA TTATGTTGCG CCAAAAGGCG CTGGAACAAA AATCCTTGCC CCCGTCCGAG 
GTATCGTCCT ACTCGTTGCA CAGCGAAGTG GGAGCCTGGA CGGCAGCTAT TAACGCTTGT 
GGCAAATCAG GACGCCTGGA AACAGCAATA CGGCTGTTTT ATGACGCCAT GCCGAGCTTT 
GGATGTGAAC CCAATACCGT GACGTGTGGG TGTTTGACAG ACTCTCTGCT ACGCGCCGGG 
CGGACGGCGG AGACCTTGGA CGTGTTGCGC TTCATGAAGA TACAAGGCAT TGCTCCCAGT 
GAGGTCATGT ATACATCTCT TATCACCCAC GCCGAGCGAC TGGTCAAAAT TGAAAATAAA 
CGCATGTACA GTCACAAAAT GGAACAAGCG GAGCAAAAAC TTCTCGACAA ATCGGGGGAT 
ACGAAAGCTA TTGAAGTGTA TACCGAGCTT ATGCAATTTT TAATTGACGG GAGCACCAAC 
AGAGCAAGCA CATCGAAATA TAGTCCCGAA AGCGGCTCGA AAGACGACAA TTCAAATACT 
CTCTTGCTCA AAGTGTTCTT GGTCTTTCAA GAAATGAAGA CAGCTGGAGC CGAACCCGAC 
GTGGCGTGTT ACAATGCTCT CCTCCGGGCA TGTGCCAGGG CGGGAGACTT TGTGCGCGCT 
CAGGACGTGC TGGCTCAAAT GCAAGCGACT GATTTATCGC CGAACGATAA TTCCTGGCGT 
GAATTATTGC GAGCCGCTGC CAAGATTGGA CGAAGTGATT TAGCGGAATC AATTTGGAGA 
CAGGCATTAG TGTACGGTAA TAGAAGGAGA TACACTGATG AACCAGAAAC GAAATGGATG 
CCGACCTTGA AGTCATTTGC CGCTTTAGTA GCATCTTATA TGCGCGAAGC GGTCGACTCA 
TCGAAAGCCG CTCAAATGCG ACTGTTCCGT CGTGCTGTGA GTCTCTACGA GGCTGCATTG 
TACGGCGATG ACGATTTGGG TATGAGTCGG CTAGATGTGA ATGAGCTATT GGACAGCCAG 
CGCACAATGT TACTGATTCT TCAAGCTACA GTCGCGTTGG AAGCTTTGAT CGTCTCAGAC 
GGAACGGATG AGCGTCGTGA GTTGCGTTCA ACCGCTGTTT CTATATTAAA GCTGGAATCC 
TGTCAACGAG TTCAAACCCA TCGACTTTCC TGGACAGCTT TGGAAGCCTA TGATACAGCT 
CGAAAATGGC AGGTCTAA 

 

Protein sequence

MAPRWDKGIC LAACLIGLLQ SLPRLAYGFY TESLPPRYQH SPSKRPTEQP LRIRRRSSNA 
LNDRINRFTA PGTAIGIAVE PTRDDAPKAT YKRNSSRKGD RFAQTSLARN RKRTTLQKTP 
EQIETQLQCA LQQLRIFSQS LPDRDAPIDM LLFPTVRECN AALAAFGDAR ELLRALRLFG 
KMRKATALQE HLRERINFAW PVPVPTLQKL LDKSGDTKAI EVYTELMQFL IDGSTNRAST 
SKYSPESGSK DDNSNTLLLK VFLVFQEMKT AGAEPDVACY NALLRACARA GDFVRAQDVL 
AQMQATDLSP NDNSWRELLR AAAKIGRSDL AESIWRQALV YGNRRRYTDE PETKWMPTLK 
SFAALVASYM REAVDSSKAA QMRLFRRAVS LYEAALYGDD DLGMSRLDVN ELLDSQRTML 
LILQATVALE ALIVSDGTDE RRELRSTAVS ILKLESCQRV QTHRLSWTAL EAYDTARKWQ 
V