| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39046 |
|---|
| Symbol | |
|---|
| ID | 7194726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011686 |
|---|
| Strand | - |
|---|
| Start bp | 206700 |
|---|
| End bp | 208019 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | FAD dependent oxidoreductase precursor |
|---|
| Protein accession | XP_002183178 |
|---|
| Protein GI | 219125837 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTTC CAGCAAAGAG CATATCATCT AAATCTTCGT CTCTTCGACA CACATGTGCT
GTCATCGGTG GTGGAATAGC CGGCCTGAGC TGTGCCCATC ATCTATCCGA TTCCTTTGCT
GTTACCTTAT TTGATACAGG GCGTCTACGT CCAGGAGGAC GGGCTTCGTC AAGGCTTCCG
GGAGACCCAG CTAAGAAAGA TGACCTTGGT GAGCATCATC ACATTTCGAA GTGCGTCGTC
GACCATGCGG CGCAGGTGCT ATTTGTTCCC GACCATGAGG CCCGCTTCGC CGAGTTTTCG
AGGCAAGTCA AAGACTGGGA GAGAATTGGT GTTGTTACCC GGTTTCCGGA GGGAAGTCTA
TACAATATTT ACAGTCGATC GTCCACAAAG AAGTGCATTG AGTTGGAACC GTTCGTCGGT
CAGCCAGCTT ACTTTGGGTC ATCTACGATG GGAATCGCAT CGATTTCCAA TGCCCTGGCT
GAGACATCTA ACTTTGAGAT TCAGCAAAAT GTTTGGGTGT CTCCTTCAAA TGGTGCGCGA
TACATGCCTA AAACAAGACA GTGGAAAGTG ACAGCTTCTG GAAAGGTGCT GGGCTACTTT
GATAGACTCA TCGTGGCTCA CAACGGAAAA TGTGCCGATC GCCTCATGTC CAAGACGCCA
GCAAAAGCCA TTCATGATCT ATTACGCGTG AACTTTGCTC CATCGGTCCC ACAGCATGGG
GGCAAGCGAA TGACGCTCAA CTCGATTTAC AGTTTAACAA TTGCCCTACC GAAAAACTCT
GCCATCGCGG CTTGTCTCCC GGCGAATTTC TTGGGAGGCT TCATTCAAAA TGACAAAGCT
CTTCGGTTTC TATCATGCCA AAGTCGCAAG TACGAATCAA TGGAAAAAGA CGTCGAGATT
TGGACGATAT TATCCTCTTC CAATTTTGCA AAATCGCACA AAGCACCTCA AGAGTTTCTT
CCGAATGAAG TTGTCGAAGA AGTCACGTTG CTGCTTATAG AAGCATTAGA GAGTTTATTT
GGGGTAACAG TTGGGAGCAT TAAGCCAATA GAGAGGCGAC TGCAATTATG GGGAGCTGGC
GTCCCGCTGA ATACTTGGGA AAATGGCAAA GGATTTCTTT ATGATGCGGA ATCTGCCGTT
GGCGTCTGCG GTGATTGGCT ACTCGATTCG TCAATTGCTG GGGCTTGGAC GAGCGGCCGT
TTGCTTGCGG ATCATTTGAA AACGAAGGAA GCGGTGAGTG CCGGGTTTGA CGGTACGTTC
GTCGCTTCTC AAGGCGCAAG TAACACCGGA ATTGCGGCAA TCAACGAAAA GTTCCGTTAA
|
|---|
| Protein sequence | MILPAKSISS KSSSLRHTCA VIGGGIAGLS CAHHLSDSFA VTLFDTGRLR PGGRASSRLP
GDPAKKDDLG EHHHISKCVV DHAAQVLFVP DHEARFAEFS RQVKDWERIG VVTRFPEGSL
YNIYSRSSTK KCIELEPFVG QPAYFGSSTM GIASISNALA ETSNFEIQQN VWVSPSNGAR
YMPKTRQWKV TASGKVLGYF DRLIVAHNGK CADRLMSKTP AKAIHDLLRV NFAPSVPQHG
GKRMTLNSIY SLTIALPKNS AIAACLPANF LGGFIQNDKA LRFLSCQSRK YESMEKDVEI
WTILSSSNFA KSHKAPQEFL PNEVVEEVTL LLIEALESLF GVTVGSIKPI ERRLQLWGAG
VPLNTWENGK GFLYDAESAV GVCGDWLLDS SIAGAWTSGR LLADHLKTKE AVSAGFDGTF
VASQGASNTG IAAINEKFR
|
|---|
| |