Gene PHATRDRAFT_39045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39045 
Symbol 
ID7194725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp204495 
End bp205601 
Gene Length1107 bp 
Protein Length368 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183177 
Protein GI219125835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAGC CTCTCACCGA TCAACCCGGA ATCGACTCGG ACGACGCCAA AATCATTTGC 
AATGAATTTC ACAAGCATCT CGACGTTGAC GAGATGATGG AGACTGCACG GGACAGCCCA
TGGTGGGTTT CTCTTTCCGA ATCATCCGAT GTGAATGTTA TCGCGACTCC TTCATCCGAT
CCAAGTGATG GCATCGGACT TATTCTGTCT AATTCCTTCA CAACCAAAAA TTTCTCCTAC
ATAAAAGAGG GAGCTCTCCA GCATCCACAA GTTAAAGCTA GTTCGGACAA GGTTGCTGCA
GACTGGACGA ATCCGACATC TTCGCGAAAG ATAAGTTCTG CTGTTTCGTC TCTGCAGCTA
TCTGACGACA TATCAGCTTG CGTGAAACCT CATAACTCGC AAAAAAATGA AGTCGTGAAA
AACCCGAATA ACAGTAAGCA GATTCAGTCT CCGTATTTGC TTTGTCCTGT CAAATCTCAT
GGCGATGGCC AAGGTGTTTT GCGATTCTCG GGCTTTGATC TTCCACAAAT CAAAGCATCA
ACACTCTCCC CTTCCACTTT TCCGCCGACC ATAGCTAGCG TCTTGCAGGC ATTGGAACCA
ACTCCGTTCG CTCCGGGCCA GAAAAGTCTT CGCCGCGTCG TTTCCAAAAG CGAATCGACG
ACATCTTCAT GCAAGGACTT AAGGCCGACC TACACTACAA GCAGGCAAAC CAATGCGGTG
TTTGCTGATG CTTCTGTGGT CCAAGATCTT CCGAGCGCCG TGTGTACTGT CCCATCAACC
GTTTCTCCTT GTGGCAAAAA GCTTTCGCCG TTGCGAGCGC TTTCTGCCTA CAACTTCTTT
TTCAGAGACG AGCGGGAACG GATTCTCCAT GGAGGTGCCG ATGACTGGAC TGCCGCTCGT
CACGCAGCCC TCTTAACCTC ACACTGGTTA AAGGATCGCA CCAAGAAACG ACAGCATCGC
AAGAGCCACG GTATGATCGA CTTCACGAGT CTTTCCAAGC TCATCTCGAT GAGATGGAAA
AATTTGCACC CGGACGGCAA AGGCTTTTTC CGTCAAGTTG CAGCCGCTGA CTGGAGACGC
TATCAGGACG AACTTGCCAA GGAATAA
 
Protein sequence
MVKPLTDQPG IDSDDAKIIC NEFHKHLDVD EMMETARDSP WWVSLSESSD VNVIATPSSD 
PSDGIGLILS NSFTTKNFSY IKEGALQHPQ VKASSDKVAA DWTNPTSSRK ISSAVSSLQL
SDDISACVKP HNSQKNEVVK NPNNSKQIQS PYLLCPVKSH GDGQGVLRFS GFDLPQIKAS
TLSPSTFPPT IASVLQALEP TPFAPGQKSL RRVVSKSEST TSSCKDLRPT YTTSRQTNAV
FADASVVQDL PSAVCTVPST VSPCGKKLSP LRALSAYNFF FRDERERILH GGADDWTAAR
HAALLTSHWL KDRTKKRQHR KSHGMIDFTS LSKLISMRWK NLHPDGKGFF RQVAAADWRR
YQDELAKE