Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39019 |
Symbol | |
ID | 7194710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | - |
Start bp | 136036 |
End bp | 137058 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183162 |
Protein GI | 219125804 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0838109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTGA GTGGGGCCGC TGTTCCGCAT CGGACTGATA CGGAGTCTGA TTCTACCTCT CAGTCTCCCC TTTTTTCCGC GAATGACGAG GATCGTCGGC TAGCCCAGGC CTTGGATCAA CAATTGGTAC TAGTCGCAGA TCACGTTTCC GTAGAGGAAC AGGTAGTGGG CGAAGAAGCG GGCGAAATCC ATTTACAAGA TAGCGATTCG TCCCTGCCCT CCTCGTCTTT GCGAGACAAT GATAATGGCG GAGCTCCTAC GGTGGGAAAC GTCGATCCCA CCTGGCCAAA ACTACCCTTG ATTGTGTGTG ATTTAGGCTA CGGCATTCCG AACGAAGCCC GCCCCCGGAA AGAGAAGATC CTCGCTATTG CTCGGCAAGT TGTCAACTTT CTGACCTGGC AACTGACGGA AACGAGAGGT TCGTCAGGTT ATGATTATGG TCGACAACGG CGTCCCGCAA CGATTATTGT GGGCTGTCCG GACATTTCCA TTCAATCCGC ATTGCTGGAT CGAATGCAGA TTCTCTGGAC GCAAGAGCAA AGTAGAGAAC CGTTTCCTTC GCATCTTGGC TTTAGTAATC GCCCTATAAC GGGACAAGCG GCTTTCTCGA CGTCGGGTCC ACGGCCACCG TCGGTACTCT ACTTGTCGCC CGATTCCGAA CACGTACTAG ACGCTATTCA AGATCCACCC GATATCATCA TTGTTGGTTT GTTGATTGAT CGTCGTGTTC AGCTGGATCG TAGCAAAAAT CGTGCGGCAG CATTGTCCCT ACCGACTGCG CGGTGGCCTC TGGAAGATGT GGTTGTCGAT ATGGATCACC GGGAGCCTTT AAACTGCGAT TGCATACTGG AAGGGACTCA GGCGTGGTTC TGGAATGTAG AACACGCGCA CAAACAACAA CAAGCAACAT CATGCCCAAC CAAGCTTGAC AAACATCTGC TTCACGATGC CATCTTTCAA GCCATCAGGC GTCATGTGGC TCGACATCCT GAGCGGCCAC GACACAAGCC ACAAAATTCA TAG
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Protein sequence | MTLSGAAVPH RTDTESDSTS QSPLFSANDE DRRLAQALDQ QLVLVADHVS VEEQVVGEEA GEIHLQDSDS SLPSSSLRDN DNGGAPTVGN VDPTWPKLPL IVCDLGYGIP NEARPRKEKI LAIARQVVNF LTWQLTETRG SSGYDYGRQR RPATIIVGCP DISIQSALLD RMQILWTQEQ SREPFPSHLG FSNRPITGQA AFSTSGPRPP SVLYLSPDSE HVLDAIQDPP DIIIVGLLID RRVQLDRSKN RAAALSLPTA RWPLEDVVVD MDHREPLNCD CILEGTQAWF WNVEHAHKQQ QATSCPTKLD KHLLHDAIFQ AIRRHVARHP ERPRHKPQNS
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