Gene PHATRDRAFT_39019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39019 
Symbol 
ID7194710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp136036 
End bp137058 
Gene Length1023 bp 
Protein Length340 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183162 
Protein GI219125804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0838109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGA GTGGGGCCGC TGTTCCGCAT CGGACTGATA CGGAGTCTGA TTCTACCTCT 
CAGTCTCCCC TTTTTTCCGC GAATGACGAG GATCGTCGGC TAGCCCAGGC CTTGGATCAA
CAATTGGTAC TAGTCGCAGA TCACGTTTCC GTAGAGGAAC AGGTAGTGGG CGAAGAAGCG
GGCGAAATCC ATTTACAAGA TAGCGATTCG TCCCTGCCCT CCTCGTCTTT GCGAGACAAT
GATAATGGCG GAGCTCCTAC GGTGGGAAAC GTCGATCCCA CCTGGCCAAA ACTACCCTTG
ATTGTGTGTG ATTTAGGCTA CGGCATTCCG AACGAAGCCC GCCCCCGGAA AGAGAAGATC
CTCGCTATTG CTCGGCAAGT TGTCAACTTT CTGACCTGGC AACTGACGGA AACGAGAGGT
TCGTCAGGTT ATGATTATGG TCGACAACGG CGTCCCGCAA CGATTATTGT GGGCTGTCCG
GACATTTCCA TTCAATCCGC ATTGCTGGAT CGAATGCAGA TTCTCTGGAC GCAAGAGCAA
AGTAGAGAAC CGTTTCCTTC GCATCTTGGC TTTAGTAATC GCCCTATAAC GGGACAAGCG
GCTTTCTCGA CGTCGGGTCC ACGGCCACCG TCGGTACTCT ACTTGTCGCC CGATTCCGAA
CACGTACTAG ACGCTATTCA AGATCCACCC GATATCATCA TTGTTGGTTT GTTGATTGAT
CGTCGTGTTC AGCTGGATCG TAGCAAAAAT CGTGCGGCAG CATTGTCCCT ACCGACTGCG
CGGTGGCCTC TGGAAGATGT GGTTGTCGAT ATGGATCACC GGGAGCCTTT AAACTGCGAT
TGCATACTGG AAGGGACTCA GGCGTGGTTC TGGAATGTAG AACACGCGCA CAAACAACAA
CAAGCAACAT CATGCCCAAC CAAGCTTGAC AAACATCTGC TTCACGATGC CATCTTTCAA
GCCATCAGGC GTCATGTGGC TCGACATCCT GAGCGGCCAC GACACAAGCC ACAAAATTCA
TAG
 
Protein sequence
MTLSGAAVPH RTDTESDSTS QSPLFSANDE DRRLAQALDQ QLVLVADHVS VEEQVVGEEA 
GEIHLQDSDS SLPSSSLRDN DNGGAPTVGN VDPTWPKLPL IVCDLGYGIP NEARPRKEKI
LAIARQVVNF LTWQLTETRG SSGYDYGRQR RPATIIVGCP DISIQSALLD RMQILWTQEQ
SREPFPSHLG FSNRPITGQA AFSTSGPRPP SVLYLSPDSE HVLDAIQDPP DIIIVGLLID
RRVQLDRSKN RAAALSLPTA RWPLEDVVVD MDHREPLNCD CILEGTQAWF WNVEHAHKQQ
QATSCPTKLD KHLLHDAIFQ AIRRHVARHP ERPRHKPQNS