Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_22510 |
Symbol | |
ID | 7194699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 66802 |
End bp | 68163 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183026 |
Protein GI | 219125521 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.162315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACGA CTACCCCGAG CCAGTCCAAG ACACTCGACC CATTGCTATT GTGGATGATT CACGGAAACT ACTATGACCT CCACACGTAT GTATCGCGGC ATCCCGGTGG AAAGGAAGCT ATTCTGTTGG GACGCGGTCG CGACTGCACC GCCTTGTTCG AATCCTACCA TCCCTTCACT TCGCAGCACC GTCGTGTATT GGAAAAACAT CGAGTGACAA TTGACACCTC GTTTTGCAGC AAACAGCAAG ACAGAAAAGT ATCGAAACAA ACAGTTTCAT CCAGCGAACA AGCCAGTGAC GTCTTTTACA ACATGTTGTG TCAGCGCGTC GCGCACGCAC TGCAATCTCA AGGAGTGGAT CCGATCCGTG ATCGAGGTGC CACATGGACA CGCAGTATCT ACTACGTCTT TCTGTTCGCC GCATTGCTAG CTAGCGGATA CGCTCACTGC ACGGGAAGCC TACTCGGTAG CCTTCTCTTT GGTGTGGCTG GTTGGTTTAT TGGTGCTTTG GGACACGATG GCGGCCACTT TGCTGTCTCT CGCCGAGCCT GGCTCAACGA TTTTTCCGTC TGGGGTATTT CCTGGTTGTG CAATCCTATC ATGTGGCAAC ACCAGCACAC GTACGCGCAC CATAGTTTCA CCAACGAATT TGATCACGAT CCGGATTTGC ACCACTTCAC AACCTTTCTC CGAGTACATC GCAAGTTTCA GCAAAACTGT ATTTATCGCA ACCAAGCCAA CTGGGTGTAC GTGTTTTGGG CCTATACCTT TGTTACCTTT GGCGCATGCT TTTGGATTCC ATGGGGCGTG TTGCGGGAGC AGACCTTGTA CGGACTCGTC GATTGGACGG ATCGGAAGCG TCCGTCACGG ACGGCGGCCT TTGTGTTCCA CTTGGTAACC TACTTTGGTC TCGTCATGGT GCTCCCCTTT TGGACGCACG GAACTTGGTA CAAGGCGTGT TTGGGTGTCA TCTTGCACAT GACCACCTCG GGCTTGATCT TTGCCTTTTT CTCGCAAATC AATCACATCA ACGAACTATC GTTGGACGAA AAGGTCGTGA AACTGCACCG ATCCACGTTG GATCCTACCG TGCGCGATTC GTGGGCCGTA GCGCAGGTGG AAGCCTCCAA CAATTTTTGC ACCGACTCGG CATTTTGGCA TCTGTTCTCC AACGGACTTA ATTTGCAAAT TGAACACCAT CTGTTTCCGG GAATCAACCA TTGCCACTTG CATCACATCG CGCCGGTCGT CCGCGAAACC TGCAATGAGT ACGGTGTGCG GTACAAGTCG TACGATAGTT GGTCCGATAT AATGCGAGCA ATGTTGAAGT GGCTCGACCA ATTGTCGGTT GGTCTGGACT GA
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Protein sequence | MATTTPSQSK TLDPLLLWMI HGNYYDLHTY VSRHPGGKEA ILLGRGRDCT ALFESYHPFT SQHRRVLEKH RVTIDTSFCS KQQDRKVSKQ TVSSSEQASD VFYNMLCQRV AHALQSQGVD PIRDRGATWT RSIYYVFLFA ALLASGYAHC TGSLLGSLLF GVAGWFIGAL GHDGGHFAVS RRAWLNDFSV WGISWLCNPI MWQHQHTYAH HSFTNEFDHD PDLHHFTTFL RVHRKFQQNC IYRNQANWVY VFWAYTFVTF GACFWIPWGV LREQTLYGLV DWTDRKRPSR TAAFVFHLVT YFGLVMVLPF WTHGTWYKAC LGVILHMTTS GLIFAFFSQI NHINELSLDE KVVKLHRSTL DPTVRDSWAV AQVEASNNFC TDSAFWHLFS NGLNLQIEHH LFPGINHCHL HHIAPVVRET CNEYGVRYKS YDSWSDIMRA MLKWLDQLSV GLD
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