Gene PHATRDRAFT_15180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15180 
Symbol 
ID7194849 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp493834 
End bp494979 
Gene Length1146 bp 
Protein Length309 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183110 
Protein GI219125696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.525006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTCAAGTTGG TGGAAAAAGA ACTCCAACCC TTTTCGGATA GTATCAAAGA GCTAGTTTCG 
TCCGATCAGC CCATTCTTTC CATGGCAGCC AAGCACTTTT TTGAAAAACG ACACGGCAAG
CGCTTCCGAC CCACGATTGT GCAACTCATG GCCAAGACGG TCGCTGCCGC GACTCCCGAG
AAGCTCGGCC CCAACCATTC CCGCGCTACT TCCAACAACA ATAATAACGC TCACCAGCAC
GAAGCCGCTA ATTCCGAATT GGAAAAAGCT GGTGGCGCCT CCGGATGGCA ATGGTCCGGA
GCCTCCACGA TTGAAATCGG TGGCGGTGTC GTGACTCCCG AAAACCACCA AGGTTCCGAA
GTTTGGCGCC GCCAGGCGCA ATTGGGCCAG ATTGTTGAAA TGATCCACGT GGCCAGTCTC
ATCCACGATG ACGTTTTGGA CGAAGCCGAC ACCCGTCGCG GCGGAGAAGC CGTCCACAAA
CTCTACTCCA ACAAGGTTGC CGTTCTCGCC GGCGATTACC TCCTCGCGCG GGCTTCGGTC
TTGTTGGCGC GATTGGAAAA TACCGCCGTC GTGCAAGTCA TGGCGACGGC TTTGGAAAGC
CTCGTGGCTG GGGAAATCAT GCAACTCAAG AGTCCCGCCG AAAGTCTATT GGAAATGGAA
AGTTATTTAC GCAAGAGCTA CTACAAGACC GCATCACTGA TTTGCTACGC TTGCCGTTCG
ACGGCCTTGT TGGGTGGACA CGCTTACGGA TCCACCGTGG CCACCGCGTG TGAAGAATTC
GGCTTCCACC TGGGACTGGC CTATCAGATC CAGGACGATA TTCTCGATTT CACCGCCGCC
GCCACCGTGC TGGGAAAGCC CGCCTTGGCC GACATGGATT TGGGTCTGAG CACGGCTCCA
ATTCTGTACG CGGCGCAGGA ATTTCCGCAT TTGAAGCCTC TAGTGATGCG AAGATTCAAA
GAAAAGGGTG ACAAGCAGGC GGCGCTGGAG GCTCTGTATA AGAGCGACGT TGCCATGGAC
AAGGCCCGGG CCTTGGCCCG CTTCCACGCC CAACGGGCCG TCGACGCCTT GTTGCGTCTC
CCGCCTTCGG AATCCCGCAA CGCCCTGGTG CGACTCACAC ACGCGGTTAT TACGCGCAAA
AAGTAA
 
Protein sequence
FKLVEKELQP FSDSIKELVS SDQPILSMAA KHFFEKRHGK RFRPTIVQLM AKTAQLGQIV 
EMIHVASLIH DDVLDEADTR RGGEAVHKLY SNKVAVLAGD YLLARASVLL ARLENTAVVQ
VMATALESLV AGEIMQLKSP AESLLEMESY LRKSYYKTAS LICYACRSTA LLGGHAYGST
VATACEEFGF HLGLAYQIQD DILDFTAAAT VLGKPALADM DLGLSTAPIL YAAQEFPHLK
PLVMRRFKEK GDKQAALEAL YKSDVAMDKA RALARFHAQR AVDALLRLPP SESRNALVRL
THAVITRKK