Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15180 |
Symbol | |
ID | 7194849 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 493834 |
End bp | 494979 |
Gene Length | 1146 bp |
Protein Length | 309 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183110 |
Protein GI | 219125696 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.525006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTCAAGTTGG TGGAAAAAGA ACTCCAACCC TTTTCGGATA GTATCAAAGA GCTAGTTTCG TCCGATCAGC CCATTCTTTC CATGGCAGCC AAGCACTTTT TTGAAAAACG ACACGGCAAG CGCTTCCGAC CCACGATTGT GCAACTCATG GCCAAGACGG TCGCTGCCGC GACTCCCGAG AAGCTCGGCC CCAACCATTC CCGCGCTACT TCCAACAACA ATAATAACGC TCACCAGCAC GAAGCCGCTA ATTCCGAATT GGAAAAAGCT GGTGGCGCCT CCGGATGGCA ATGGTCCGGA GCCTCCACGA TTGAAATCGG TGGCGGTGTC GTGACTCCCG AAAACCACCA AGGTTCCGAA GTTTGGCGCC GCCAGGCGCA ATTGGGCCAG ATTGTTGAAA TGATCCACGT GGCCAGTCTC ATCCACGATG ACGTTTTGGA CGAAGCCGAC ACCCGTCGCG GCGGAGAAGC CGTCCACAAA CTCTACTCCA ACAAGGTTGC CGTTCTCGCC GGCGATTACC TCCTCGCGCG GGCTTCGGTC TTGTTGGCGC GATTGGAAAA TACCGCCGTC GTGCAAGTCA TGGCGACGGC TTTGGAAAGC CTCGTGGCTG GGGAAATCAT GCAACTCAAG AGTCCCGCCG AAAGTCTATT GGAAATGGAA AGTTATTTAC GCAAGAGCTA CTACAAGACC GCATCACTGA TTTGCTACGC TTGCCGTTCG ACGGCCTTGT TGGGTGGACA CGCTTACGGA TCCACCGTGG CCACCGCGTG TGAAGAATTC GGCTTCCACC TGGGACTGGC CTATCAGATC CAGGACGATA TTCTCGATTT CACCGCCGCC GCCACCGTGC TGGGAAAGCC CGCCTTGGCC GACATGGATT TGGGTCTGAG CACGGCTCCA ATTCTGTACG CGGCGCAGGA ATTTCCGCAT TTGAAGCCTC TAGTGATGCG AAGATTCAAA GAAAAGGGTG ACAAGCAGGC GGCGCTGGAG GCTCTGTATA AGAGCGACGT TGCCATGGAC AAGGCCCGGG CCTTGGCCCG CTTCCACGCC CAACGGGCCG TCGACGCCTT GTTGCGTCTC CCGCCTTCGG AATCCCGCAA CGCCCTGGTG CGACTCACAC ACGCGGTTAT TACGCGCAAA AAGTAA
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Protein sequence | FKLVEKELQP FSDSIKELVS SDQPILSMAA KHFFEKRHGK RFRPTIVQLM AKTAQLGQIV EMIHVASLIH DDVLDEADTR RGGEAVHKLY SNKVAVLAGD YLLARASVLL ARLENTAVVQ VMATALESLV AGEIMQLKSP AESLLEMESY LRKSYYKTAS LICYACRSTA LLGGHAYGST VATACEEFGF HLGLAYQIQD DILDFTAAAT VLGKPALADM DLGLSTAPIL YAAQEFPHLK PLVMRRFKEK GDKQAALEAL YKSDVAMDKA RALARFHAQR AVDALLRLPP SESRNALVRL THAVITRKK
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