Gene PHATRDRAFT_15160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15160 
Symbol 
ID7194803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp274078 
End bp274488 
Gene Length411 bp 
Protein Length137 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183193 
Protein GI219125868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0017865 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TATATCAAGA CAACAACACA CAACCATATT AGTCGAAGTG CAACCATTCA CGGATCGAGA 
CAAGTAGAAA TAAAAGGTCG AACGGTATTG GAAGCCGAGA CAGCAATTCA TGGAGACCTC
GCTCTGGTGC GCATCGGCCG TTACGTTTAT GTCGAATCCG GTACAACGCT GAGGCCTGCT
CCCCAACCAC AGCTAATGAT CCCCATTGAC TCATCAACTA CTTACATTCC TATGATAATT
GGTTCTCACA CAATCATTGG AAGTAATTGC ATGATTCAGG CGGCTGCTAT CGGTAGTTTT
TGCTGTATAG GTAACAACGT CACGATAGGA GAACGTGTAA TTGTTAAAGA TTGCTGCGTG
ATTGCCGATA ACGTGACACT AGGCCCCGAC ACCGTGATTC CCCCCTTTAC C
 
Protein sequence
YIKTTTHNHI SRSATIHGSR QVEIKGRTVL EAETAIHGDL ALVRIGRYVY VESGTTLRPA 
PQPQLMIPID SSTTYIPMII GSHTIIGSNC MIQAAAIGSF CCIGNNVTIG ERVIVKDCCV
IADNVTLGPD TVIPPFT