| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38966 |
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| Symbol | |
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| ID | 7203772 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011685 |
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| Strand | - |
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| Start bp | 660695 |
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| End bp | 662494 |
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| Gene Length | 1800 bp |
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| Protein Length | 555 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183005 |
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| Protein GI | 219125472 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00578111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTATC TTAACGCCAT CACCCTTTTG ACTTTTGGGT GGATGCCTTC GCTCTCGGCC
CAAGTCCTCA CGCACCGCAA GCTCCAACGT CTGCCGCAAA GCCAAGTGAT CCCAGGGCAG
TACGTGATTG AGCTGGATCC GAGCATTCCC GATTCACAAG GATTTGCCGA AAAAGTCCTC
AAACGAACGT TTCGCAAGAA CATAATTGAG ACTTACGACT ACGCCATGAA AGGATTTGCT
GTCAAGGATG TCCCCGATAT GGTGTTGAAT TTCATACTCA ACATGGACGA CGTGCTATCT
GTGTCGGAAG ATGGTATCGT TGAAATAGAG GCTATCCAAA ACAATCCGAC TTGGGGTCTC
GATCTCGTCG ACGGATCCGA CGACAATCGC TATACATACA CATACACGGG GCGAGGTGTC
GATGTGTACA TCGTTGACAC TGGCATTCAA GCAAATCATC CCGATTTTGA AGGTCGAGTG
AGGAGCTGCG TCTCCTACAC TGGAGAATGT AAGTTTGCAT TCCGCATCTA GAGAAATCCT
TTCTCCCCCA CAAAAATCCG AAGTCTTACG TGCGCGTTTT TCCTCTTGTA GCATGTGGGT
CGGATCTGAA CGGACACGGT ACACATGTGG CCGGAACCGT TGGTTCGAAA ACCTACGGTG
TGGCCAAGCA GGTGTCGCTG CACGACGTTA AAGTGCTGAA CCAAAGGGGT AGCGGGTCCT
ACAGCGGCGT GATTGCAGGC GTTGACTACG TTACCAAAAT CAAAGAAAAT AACCGAAGTC
GCAGAATCGT CATTAATATG AGTCTCGCGG GTGGCGTATT CGCGAGGCTA AACAGCGCTA
TTGACTCCGC CGCAGCCCAA GGCGTCGTCG TCGTAGTGGC CGCTGGAAAC AGTGGCGCCG
ATGCCTGCAA CGCCTCTCCT GCATCAGCTA GCGGTGCATT GGTAGTCGGT GCCATTAATG
ATCGCAATCA GCGTACAAGC TGGTCTAATT GGGGCAGCTG CGTCGATATT TTTGCCCCAG
GGACCGGGAT CCTGTCGACA GCCAAAACTG GTGGCACGAG CACGAAGTCG GGTACGTCCA
TGGCATCACC GCACGTAGCC GGCGTTGCCG CCTTGTATTT AGAGTCAGGC AGAAACACCA
ATTCTATCAC CTCCGATGCG CGGACTGGCC AACTAGGCAA CTTGGAAGGA TCCCCCAACC
GACTTGTGCG CACTTCCCGA TTACCCGCTA GGAACACTCC CCAAGACGAT ACCGATGCAC
CGGTCAGAGC ACCTACTCGC CCACCCACTC GTGCCCCAGT TCCTGCTCCA ACCCGACGGC
CGACGCGTGC CCCGACTCGC GCCCCAGTCC CTGCTCCCAC CCGTCGGCCT ACACGTGCCC
CGACTCGCGC CCCGGTCCCT GCTCCCACCC GTCGGCCTAC ACGGGCCCCG ACTCGAGCTC
CCACCCGACG ACCCACTCGG GCCCCGACTC GAGCCCCCGT CCCTGCTCCT ACCCGACGAC
CTACTCGCGT CCTAACGCGA GCCCCTGTCA CTCCTCGGAC CCGAGAGCCC ACTCGTGCCC
CTGTTCCAGC TCCCACGCAG CCCCCGGTTG CTCCGCAGTG TTTGCCTGCA GGTGAACTCT
GCGAAAGGTC CAGCATCTGT TGTGACACGA TGAGCTGTAG CCGATCCTGG ACACCGTCTC
GTGGACTCCA CAGCTCTTGT CGATCTGAAT CTGGCTGGTG GGGCTACTAG TAGTCTCGCA
CTTGGGGACA ATTGCTTTTT GGCAATGCTG TCTTTGGCCA AAGTGTCGGA AGACATATAG
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| Protein sequence | MKYLNAITLL TFGWMPSLSA QVLTHRKLQR LPQSQVIPGQ YVIELDPSIP DSQGFAEKVL
KRTFRKNIIE TYDYAMKGFA VKDVPDMVLN FILNMDDVLS VSEDGIVEIE AIQNNPTWGL
DLVDGSDDNR YTYTYTGRGV DVYIVDTGIQ ANHPDFEGRV RSCVSYTGES CGSDLNGHGT
HVAGTVGSKT YGVAKQVSLH DVKVLNQRGS GSYSGVIAGV DYVTKIKENN RSRRIVINMS
LAGGVFARLN SAIDSAAAQG VVVVVAAGNS GADACNASPA SASGALVVGA INDRNQRTSW
SNWGSCVDIF APGTGILSTA KTGGTSTKSG TSMASPHVAG VAALYLESGR NTNSITSDAR
TGQLGNLEGS PNRLVRTSRL PARNTPQDDT DAPVRAPTRP PTRAPVPAPT RRPTRAPTRA
PVPAPTRRPT RAPTRAPVPA PTRRPTRAPT RAPTRRPTRA PTRAPVPAPT RRPTRVLTRA
PVTPRTREPT RAPVPAPTQP PVAPQCLPAA DPGHRLVDST ALVDLNLAGG ATSSLALGDN
CFLAMLSLAK VSEDI
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