Gene PHATRDRAFT_48282 details

Gene Information

• Locus tag: PHATRDRAFT_48282
• ID: 7203379
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: -
• Start bp: 719534
• End bp: 725803
• Gene Length: 6270 bp
• Protein Length: 1567 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002182749
• Protein GI: 219124937

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAATGT TTGCATCGAC CACTCGCAGA CATCACGCTT CTCTGACCAG TGTTCTTTGC 
TTGCTGGTCT TGACAGTTCC TCTTTTTGCG CAGACAACGC CGCAACGTCA AATTGTGTCA 
GAACTCTCGC TCTGCGTGGA GGTGGCTGGA GCGAGCCAAG ACGACGGGGC CTCCATATTT 
CAAGGGGATT GTAATGACGG AAACAAGCAT CAAGTCTTCG ACTTCATTCC TGCTCCCGGT 
ACAGACAGCG GTTTTCATCG AATTCGAGCC TCGCACTCCA ACAAGTGCCT TGGCGTGGCT 
GATGGGGCTT TAGCACCTGG AGCTGAGGTA GTGCAACTGT CTTGTGTCGA CAACAATCCC 
AGTACGCTGT GGAAACAACG TGATGGGGCA TTGATCTTGC AACACTCTGG TTATTGTTTG 
AGCGTCGATG TCAGTTCGCG TTCCACATCA GGGGCCTTTA TGGTGCAATG GTTTTGCGAC 
AGTCCCAGCG TCAAGTGGCA AGTTAAGAGT GTGTCCGAGC AACATGACGG ACTACAGCAA 
CTTTCTAAAC GCGGCAATTC TGTGGGAAAG TCTCAATCCG GATTCTATCT CAGTACGGGA 
ACGCCCCACG ACAACCAGTT TCTTAGTACG AATTCATCCT GGACGGAGAC AGAAACCAAC 
GGCGCAACAT ATTCGGGATG CGGTAGCTAT GGGCAAGACA CATTTAACCG TCATCGCACT 
GGGCCTTCCT TTGTATTTAC GATACCAGGG TTCGTTGCGG GCGATACGTA CGACGTAACA 
ATGGGTTTCG CCGAGATTTG GGCCCCGCAA TGTGAAGACG GAAAGCGAAT TATGGATATA 
GCAGTCAATG GCAGAAGCTT TGCGCATGAC TTGGATGTAT ACAATGCCGC TGGTGGGTGC 
CATGCTGCTT TGATTCTGAC CAAGTCGTTC GAGGCCAATA GCAGAGGAGA CTTTGTCATC 
GATTTTTCAA GTACGATTCA CAACCCAATT GTTTCATTCA TTCAGATACA ACATGTTGGA 
GCAAAGGGTA TACAAGCCCG AATGCTAGCG GATGTACCTA CGGCTTCGCC AAAGCTCAGC 
ACCGAGCCCA GGATTGCGCG AGCAATAGAT GTCTCCACCA TTGTATCAGA GGGATTGAGT 
GGTCTCTGCG TTGATATAAT TGACGGCAGT GAAATGGATG GTGCTCAGGC TATCCAGGCG 
TCTTGCAACG GAGGTGCCAG TCAGGAATAT CAATTCTTGA TTGTTGGGGA GGGTCAGTTT 
CAAGTTGTGG CCTCTCATTC ACAAAAGTGT TTGGGTGTCG CCGACTTCGA TGTGACTGAG 
AGCGCCAATA TCATTCAACT ACCGTGTACA AACAACACCC TTTGGTACGT TGTTGGCGAT 
AGCGCATACC TGCAACTTCG CGTTCTCCAC AGTGCCAAAT GCTTGAGTAT TTTCGGAGCT 
TCGATTGCTT CGGGTGCGAA GCTTGTTCAG AAAGCCTGCA ATGAAGGCCT CGATCAGCGC 
TGGAGTGTCG CTGACGGCTT GTTTGTAGTG GAGACGCTGA AGCCTTCAAC GTCAGCAGCT 
CCAAGCCCGA GTCCCAGTGT GAGCTTTGAG CCAACGAGAG CGGGAGCGGG AAAGGGCCCC 
CCTGCTCCGA CAATTCAACC AATTGACGTT CCAAGTAGTA TGCCTGCCTT ACGCGGATCC 
AGGTCACCCT CGCGGCGACC TTCGCAAGCC GTAGGTGTTT CACCGGGGCC ACCGCTGTTC 
TATCTCAATA CTGGAACTGA TCAAGACCTT GAATATATCT CTGGTGGTGC CGTTGGTGTC 
TATTCCAAAC CTGGGGCTCA GATTTTCGAA GCTGGAAGTT ACGGAGAGGA GACATTCAGG 
AGTCACCGAT GGGGAGAAAC GTTCGTGATT ACTATCCCTG GACTCAGTGG CGGCGAGATG 
TATACCATAT CACTCGGCTT TGCTGAGATC TTCTTTTGTG ACGAAGGTCA GCGTATTATG 
ACCATTACTG TAAACGACGA GGTTTTGGAG GCCGACTTGG ATGTGGTTGC TACCACTGGT 
GCGTGTAATA CTGCTCTCGT GCTGAGGGAA GATTTTGCAG CAAATAGTGA TGGTGCATTT 
GTCGTTGCTT TTTCCAGCCT TGTCGACAAC GCAATGGTTT CGTTCGTCGA GATTCATTTG 
GCGGGGACAT TGTCACCATC CTTTTCTCCA GCTCCTGGCT TTGTACCGAG TTCAAGTGCA 
GAACCTACCG TAGCTCCGGA GCCAAATCCG TGGGAAGGTG AGTACGCCAT GTCTCTGGTA 
GCTGTAGCTG CTGCAAATCT GGACGACGGA AGAATTCTGG CTTGGTCCGC GTGGAGTAGG 
ACCGACTATG CCCGTAGTGT CGGAAAAACT TTCATTTCCA TTTTCGATCC TTCCACCAAT 
GAGAGTACTG AGGGAGAAAT CACAAACACG AATCACGATA TGTTTTGCCC CGGGACTGCT 
ACGTTAGGCG ACGGTCGAAT TATGATTACC GGAGGGTCTA GTGCAGCGTC CGTTACATTT 
TTCGACCCCT CCGCTAATAA CTGGTACAGA GGACCACCTA TGAATATTCC TCGGGGCTAC 
CATTCGATGA CTGTGCTAGG GGATGGATCG GTCTTTACTC TCGGAGGGTC ATGGAGTGGT 
GGACGAAGGG GCAACAGGGG AGGCGAGGTA TGGAGTCCAA GCGGTGGGTG GGTTTTGAAG 
ACTAACATTC TCATTCCCGG AAGCTCCACC TTGCTAACAA ACGACCGTGG TGGTATCTTT 
CGGTCGGACA ACCACATGTG GCTCTTCACT GCTCCCAACG GTAAAGTATT TCATGCCGGA 
CCGTCGCAAA GAATGCACTG GATCGATATT GCTGGCGAAG GAGAAATATC CGACTCTCTT 
CTCCGTGGCA ACGACAACGA CGCTATGAAC GGCAATGCGG TCATGTTTGA TATTGGCAAA 
ATTTTCACCG TCGGAGGCGC TCCCAATTAT GAGTATGGTG ATAACGAAGG AACAAAGCTG 
GCCCACGTTA TTGATATCAA CGCTGGAGAA GGGTCTGAGA CTGTTGAGAG GGTCGGTGAC 
ATGGCCTTCG CAAGGACACT GGCTAATAGC GTGGGTCTTC CCTCGGGAGA GGTGATTGTT 
GTTGGCGGTC AAACGCGAGT ATTTCTCTTC ACAGACAGAG AAGCTGTCTT TGCTGCCGAG 
ATTTGGAGTC CTATCACAGG CCAGTTTACG ACTTTGGCGG AAATGAAGAT ACCGCGAACC 
TACCACAGTG TAGCAATATT GATGAAAGAT GGTCGCGTAT GGGCAGCAGG TGGCGGCCTT 
TGCGGAAATT GTCCTACAAA TCATCAAGAC GCTGAGATTC TTACACCACC CTACTTGCTC 
AATGGAGATG GTTCCCTTAA GACCCGGCCT GTCATAGAGT CTTCACCGTC TCGGATAGTC 
CCCGGTGAGA CGATTACTGT ATCGGTGGAC AGGAGCGGTA GCCACAACTT TGTGCTTATG 
CGGATTTCCG CTGTTACTCA CTCTGTGAAC AACGACCAGC GGCGCATACC ACTCACGATT 
GTAGGTGGCG ACAATAATTC CTTTCAATTG ATTGCTCCGG ACAACTACAA TGTGACTGTA 
CCTGGAACAT ACTTCTTGTT CGCCATGAAT GCAGATGGTG TTCCAAGTGT TGGAAAGACG 
ATTGTAGTTG ACGCACCAGA CGGTCCGGTG CCAGAGCCGT CGCTCATCTT TCCTATCGAG 
TCTGCGGACT TTAGTGGTCT GTGCGTAAAT ATTGCCAGCA ACAGCTTTGA GAATGGGGCC 
CAAGCTACTC AATGGACGTG CAATGAGAAC GCTAACCAGC AATTTGAGTT CCAATTTGTG 
GAAGGAGGGC TCTACCGTAT TGTCGCCTTC CATTCCCAGA AATGCTTGAC TGTTACTCAA 
GGATCGATAA GTGAGGGAGA AAATATTGTA CAAGAGCCTT GTGACGACGT TCCTCATCAA 
CTATGGACCG TCACGGGATC TGGGAGTGGC CAGGAACTCA AGGCTTCACA TTCCAACAAA 
TGCTTGAGCA TTTTTGAATC CTCCATGGCG ACTGGCGCGA GGTTGGTTCA ATTGGAATGC 
ACTGAGGGAC CCGCTCAACT CTGGCAAATA GATGACCGAT TGACCTTATC GGAGGTAGAG 
GCCCCATCCC CCTTTAGGCC ACCGAGCTTG GCACCAAGTG TGAGCCCCGC GCCAGTTGCA 
GCGTTGGCAA GTCTACCACC GACAACAGCC GCAGGGCCGC CAGTCTTCTC CCTTCGAACA 
GGATCATCGC TAGACCTCCC TTACATATCA GCTGGGGGGC CGGCAAGCAA GACTTACCAG 
GATCCTACTC CGTCAGCAAT CTCCGGAGCC GGAGCGTATG GGGACGCAAC ATTCCAGCGC 
CATCGATGGG GGAACACCTT TACTTTTACC ATCCCTGGCT TCGTGGCCGG CAACACATAC 
GCTGTCACCC TTGGTTTCGC GGAGGTCTAC TTTTGTGCTG CGAGTAGCTC CCGTACCATG 
ACTATAACCG TAAACGGCGA AAGCTTCGCC ACGAATTTGG ACGTCTTTGA AGCTGCCGGC 
GGTTGCAATT CGGCTCTTTT ACTGACGCAA GAATTCAGCG CCAGTAGTGC AGGTGATTTT 
GTTTTAGCCT TTGCCAGTCC GATTCAGAAT GCCATGATAT CACTGATCGA AGTAAGATCA 
GACGCAGGAT CGCCTCTTCC TGATGAGTCT GTGCAGGCAC CGCAGGGTCC GACTGTCTCC 
CCAGGGACGA CCCAATCACT GCAACCAAGC TCGGTTCCGA TGCTGAGCGC CGAGCCAACG 
GATATATCGG TGCCACCTTC AGTCGTGCCG TCTGTACAGC CAGTCACGAT GCCCAGCATA 
ATTCCGTCCT CAATAGTAGG GCAGCCCAGC GGTTCACCGC TTGATAAGCA GAGTCGGACA 
CCGTCTGTCA TACCATCCTC GTCTCCGAGT TTCAGTCGCG GGTCAAGCTT GACTCCAAGC 
ACAGGTCCTA GCTTGACTCC TAGTTTATTC CCATTTTCCC TGCCATCGAC CACCCCAAGC 
CGATCACCTG CTTTCGAGCG GAGTCCTACC CCATCAACAA CACCAAGTAA CTCTCCGTCG 
TTGCAGTTGT CAGAAGAGCC GAGCGCCTCT CCCCTTGTCG CGCAAAGTCG TAGTCCGTCT 
ACCGTGCCGT CTTTGTCTCC AAGCTCCAGA CCTGAGTCGT CCATAAGGCC AAGCGAAGGA 
CCTAGCTCAA CACCTAGTTA TGGGCCTGTC TCCCCGCCAT CAACCACACC AAGCCGATCG 
CCTGCTCGAG AGCCGAGTCG CGTTCCGTCG ACCACACCGA GTTCATCTCC AAGCGCTCTG 
CCAAGTACGA CCCAAATTAC TACTGGTGTC CCAACTACAG CTACTCCGGG AGAAGCATGG 
ACGATACAAT CCAGTGCCGC AAATAATAAC TGGACTGCGG TGATATATGG CAACGGGACA 
TTTGTCGCAG TTGCGGCAAC CGGCATCGGC GACCGGGTCA TGACAAGTCC CTATGGTACC 
ACGTGGACGA TACGAGCGAG TGCAGCAGAT AACGACTGGA ACGGTCTGAC GTACGGTGAT 
GGGATATTCG TCGCTGTTGC CAGCACGGGT CTTGGCAACC GGGTCATGAC CAGTCCAGAC 
GGCATCGCGT GGGCTAGTCG ACCGAGTGCT GCGGACAATA ACTGGACTGC AGTGGCGTAC 
GGCAATGGAA TATTCGTCGC GGTTGCGGCA TCTGGTATTG GCAACCGTAT CATGACGAGT 
CGTGACGGCA CAACTTGGAC ACTCAGAGGG AACGCCGTAG ACAATGAGTG GCGAAGTGTA 
ACGTATGCCG AGGGGACGTT CGTCGCTGTA GCGAGTACCG GCATTGGGAA CCGAGTCATG 
ACGAGTCCCG ATGGCATCCA GTGGACGATT CAAACCAGCG CTGCAGACAA TTGGTGGTCT 
GCCGTCACGT ACGGCGACGG GACGTTTGTT GCTGTTGCGG CAACCGGCAC TGGCGACCGG 
GTCATGACAA GTCCCGACGG GATCACATGG ACGACTCAAA CAAGCGCCCC AGACATTGAT 
TGGCGCAGCG TGACTTATGG GGATGGGATA TTCGTTGCCG TTGCGAGTAC CAGTATTGGC 
AACCGGGTCA TGACAAGTCC TGACGGGATC ACGTGGACGA CTCAAGGCAG TGCCAACGAC 
AATGATTGGC ACTCCGTGAC TTATGGCAAT ACAACATTCG TTGCCGTGTC AAAAACGGGA 
ATCGGAAACC GGGTCATGTC CAGTGGTTAA 

 

Protein sequence

MGMFASTTRR HHASLTSVLC LLVLTVPLFA QTTPQRQIVS ELSLCVEVAG ASQDDGASIF 
QGDCNDGNKH QVFDFIPAPG TDSGFHRIRA SHSNKCLGVA DGALAPGAEV VQLSCVDNNP 
STLWKQRDGA LILQHSGYCL SVDVSSRSTS GAFMVQWFCD SPSVKWQVKS VSEQHDGLQQ 
LSKRGNSVGK SQSGFYLSTG TPHDNQFLTK GIQARMLADV PTASPKLSTE PRIARAIDVS 
TIVSEGLSGL CVDIIDGSEM DGAQAIQASC NGGASQEYQF LIVGEGQFQV VASHSQKCLG 
VADFDVTESA NIIQLPCTNN TLWYVVGDSA YLQLRVLHSA KCLSIFGASI ASGAKLVQKA 
CNEGLDQRWS VADGLFVVET LKPSTSAAPS PSPSVSFEPT RAGAGKGPPA PTIQPIDVPS 
SMPALRGSRS PSRRPSQAVG VSPGPPLFYL NTGTDQDLEY ISGGAVAPGF VPSSSAEPTV 
APEPNPWEGE YAMSLVAVAA ANLDDGRILA WSAWSRTDYA RSVGKTFISI FDPSTNESTE 
GEITNTNHDM FCPGTATLGD GRIMITGGSS AASVTFFDPS ANNWYRGPPM NIPRGYHSMT 
VLGDGSVFTL GGSWSGGRRG NRGGEVWSPS GGWVLKTNIL IPGSSTLLTN DRGGIFRSDN 
HMWLFTAPNG KVFHAGPSQR MHWIDIAGEG EISDSLLRGN DNDAMNGNAV MFDIGKIFTV 
GGAPNYEYGD NEGTKLAHVI DINAGEGSET VERVGDMAFA RTLANSVGLP SGEVIVVGGQ 
TRVFLFTDRE AVFAAEIWSP ITGQFTTLAE MKIPRTYHSV AILMKDGRVW AAGGGLCGNC 
PTNHQDAEIL TPPYLLNGDG SLKTRPVIES SPSRIVPGET ITVSVDRSGS HNFVLMRISA 
VTHSVNNDQR RIPLTIVGGD NNSFQLIAPD NYNVTVPGTY FLFAMNADGV PSVGKTIVVD 
APDGPVPEPS LIFPIESADF SGLCVNIASN SFENGAQATQ WTCNENANQQ FEFQFVEGGL 
YRIVAFHSQK CLTVTQGSIS EGENIVQEPC DDVPHQLWTV TGSGSGQELK ASHSNKCLSI 
FESSMATGAR LVQLECTEGP AQLWQIDDRL TLSEVEAPSP FRPPSLAPSV SPAPVAALAS 
PSLTPSLFPF SLPSTTPSRS PAFERSPTPS TTPSNSPSLQ LSEEPSASPL VAQSRSPSTV 
PSLSPSSRPE SSIRPSEGPS STPSYGPVSP PSTTPSRSPA REPSRVPSTT PSSSPSALPS 
TTQITTGVPT TATPGEAWTI QSSAANNNWT AVIYGNGTFV AVAATGIGDR VMTSPYGTTW 
TIRASAADND WNGLTYGDGI FVAVASTGLG NRVMTSPDGI AWASRPSAAD NNWTAVAYGN 
GIFVAVAASG IGNRIMTSRD GTTWTLRGNA VDNEWRSVTY AEGTFVAVAS TGIGNRVMTS 
PDGIQWTIQT SAADNWWSAV TYGDGTFVAV AATGTGDRVM TSPDGITWTT QTSAPDIDWR 
SVTYGDGIFV AVASTSIGNR VMTSPDGITW TTQGSANDND WHSVTYGNTT FVAVSKTGIG 
NRVMSSG