Gene PHATRDRAFT_48262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48262 
Symbol 
ID7203391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp670674 
End bp672423 
Gene Length1750 bp 
Protein Length559 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182736 
Protein GI219124909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTTTACCTG GACAAATTGC TTTTTTTCGC TCTAGTTTCG GCAAAAGATG TACCTGCAAA 
AACGCATGAA ATGCTTCGCA CAAACGACGA CTTCGAACGA CACGTTGGGA TTCCAAGCGA
CCTTCAGCAG GATCAACGCG ACTTGGGAGA ATCACTCACT GCTCCCAGGA GAAACGAAAA
AATGACGTCG TATTGGAAAC CAACGAAGCG TCTCATCGTC ACTTACAGGA ATGAAAAAGG
GAAGCACGAT GCAATTTATG CTTCCAACGC GGTCTACAAT GAGCTCGACA ACGAGAATGC
TGTTGCAATC GAGGCGGATG ATCATGCCGC TATGTATCTG AAGCTAGACC AAAACATCGA
GCAAGTAGAA GAAGACAGTA TTTGGGAAGC GCAAGGATAT CTAGAGGAAT ACGTAGATCG
AGGAGACCGT CGTCTGCAAG AGCTTATCCC ATACGGGATA AGCATGATTC AGGCAAACCA
ATTGTCAATT GGAAGTAGCC CGGTGACAGT TTGCATCGTT GATACAGGCG TTGATATTAC
TCACCCTGAT CTTGACGCTG ATAACGCGGA CGGGGCGAAC AGATTCTCCC AGGTCGATGG
CAGTGTCATG AACTGGTACG ACGATAGCCG TGGACACGGA TCGCACGCTG CCGGCATAGT
TGCTGCTCGC ATCGAAAACA ATCTCGGTAT TCGTGGAGTA GGAGAAATTC CCCTGTTTGT
TACCAGAGGG CTTAACGATG ATGGTAGAGC GTATGAGTCC GACATAATTC AAGCAATTGA
GCAATGCAAG TTGGCTGGTG CAAAAGTTGT AAGTCTCAGT CTAGGTGGCC TTGCCGCCAC
AAGCCGAACG AGATCTTTGT ATTCTCGCTT GGACGAGCAG GGTATTCTTG TGTTTGCAGC
GGCGGGTAAT GAGGGATCAC CTCTGTCCAT TTTCCCAGCT GCATTGCCTG AAGTGGTCTC
TGTGGCTGCC GTCCAAGAAG ACCGTAGCTA CTGGAACAGC TCAAACTATG GTCCTTACAT
TGAACTTTCT GCACCGGGAC GCAGAGTCTT GTCAACAGTC CCCCCTGATC GTTACGCTAC
ATATTCAGGA ACATCCATGG CTACGCCATT TGCTGCGGGA GCAGCAGCAT TGGTGTGGAG
CCACTTTCCA AGCTGCTCGC ACAAACAAAT CCGCTTTGCC ATGGCGTACA CTGCGGACAA
GAAGGATTCG ACTCAAGGCT GTAGCGAGCG CTACGGCCAT GGAATCGTTC AAGTGAAGGC
CGCGTACGAT TTTTTGTTAG TACACTCGTG TACTGCATTT GAATGGGGAT TTTCGAGTGG
GAATGGAACA TGTACGACCG TTGATGAGTC TTTTCGTGCA TTCGAAACAA ATGTATTCCT
CCCAATCGCA GCCCAGACCA CGCCACAAAC TTTGAGGCCT ACTAGCAATC CCACTCACCT
TCCCACCGCT CGGCCCACGT CTGCTTCCAT CAATAGCTCA CCACCCACTA GGCTGAGAAC
CTCCAATCCT AATCACAAAC CCACTGGTGC TCCAATCTCT CAAGTAGTGG CTTTTCCTGT
CAGCGAGCCA AATCCACAGG CTTTGCCGGC TACGACGTCT AGGCCTACAA GCAACCCCAA
TACAACGCGC ACACCGCTGG TTGATTCTTC GTCGGCAGTT TCGCCTCCTC GACGACCAAA
TTTTTCAATA TGGGCAAAAC CATTACATTG GAAAAGATTG ATTCAGAATA GTATAGCGAG
TGAGCCCTAG
 
Protein sequence
MLRTNDDFER HVGIPSDLQQ DQRDLGESLT APRRNEKMTS YWKPTKRLIV TYRNEKGKHD 
AIYASNAVYN ELDNENAVAI EADDHAAMYL KLDQNIEQVE EDSIWEAQGY LEEYVDRGDR
RLQELIPYGI SMIQANQLSI GSSPVTVCIV DTGVDITHPD LDADNADGAN RFSQVDGSVM
NWYDDSRGHG SHAAGIVAAR IENNLGIRGV GEIPLFVTRG LNDDGRAYES DIIQAIEQCK
LAGAKVVSLS LGGLAATSRT RSLYSRLDEQ GILVFAAAGN EGSPLSIFPA ALPEVVSVAA
VQEDRSYWNS SNYGPYIELS APGRRVLSTV PPDRYATYSG TSMATPFAAG AAALVWSHFP
SCSHKQIRFA MAYTADKKDS TQGCSERYGH GIVQVKAAYD FLLVHSCTAF EWGFSSGNGT
CTTVDESFRA FETNVFLPIA AQTTPQTLRP TSNPTHLPTA RPTSASINSS PPTRLRTSNP
NHKPTGAPIS QVVAFPVSEP NPQALPATTS RPTSNPNTTR TPLVDSSSAV SPPRRPNFSI
WAKPLHWKRL IQNSIASEP