Gene PHATRDRAFT_38633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38633 
Symbol 
ID7203344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp570332 
End bp570751 
Gene Length420 bp 
Protein Length139 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182560 
Protein GI219124542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000992773 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGAT CCGGCGTTTC TAGTCTCTGT TTGTCCGCGT TGTCCATTTC GTCTCCCGGT 
GAACCTTTTA ACTGTAAAAC GCTCCAAACC TCCAGTCAAC TCGGATCTAT GCCTTCGTTG
GCGTGTTCCG AAGACGATGA TTCCATGAGT ACGGCCAACC CGAGTTCTTC CACCGAAAGT
TTGGGTCGAG GTCTCGTGCG AGGTTGGGGA AGCGTCGAAT CCCGACGCGG GTACGTGGAT
CTTTCTGCAC TCACGTCCAC GAACCGGAAC AGGGCATGCA CCCCGTTGCG ACGATTACCA
CAGCCCGACG CAGTATCCAC TTTGACAACT CACGATTGTG GACAATCACA AGGACCCGCT
TGGGGGTACT TTGTCGATAC GCCCATGGAA GACCAGGAAG AGGAAGCCAT GACTTGGTAA
 
Protein sequence
MTRSGVSSLC LSALSISSPG EPFNCKTLQT SSQLGSMPSL ACSEDDDSMS TANPSSSTES 
LGRGLVRGWG SVESRRGYVD LSALTSTNRN RACTPLRRLP QPDAVSTLTT HDCGQSQGPA
WGYFVDTPME DQEEEAMTW