Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38628 |
Symbol | |
ID | 7203342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | + |
Start bp | 563410 |
End bp | 564081 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182557 |
Protein GI | 219124536 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0250872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAATC CACTATTCCT CGGGTTGTAC AAATTCTGGA GCGTCTACAA CGGTGACACA AGCTTTCTCC CGCTCTATTT ACCTTTGCTC TTCTGGGTCG TCTCCTATAC GTACTGCCGT TTCGTGCGAA GAGAGTTCCA CAAATGGACT CTTCTGCACA GTTTTCACAA TTTCGGGGCG ATTGTGTTGG GTTTAATTTC TCTCTACTAC GACAACGATG CCGTCTTCAG CGAACGCCTT TCGATCCTGT GGTCCATGGC TTACTTTTTG GTAGATATTG TGGACTGTAT CGTCAGAGGC GACGTCGCGT ACACCGTGCA CGCCACCTTT TGTTTGCTAT TGGGAGTGGC GAACTATACG ACCCCCGTCT GTCGCGAGTT GCGCATGAAT TCCAAAGCCG CCTTGCTCGA ATGCAGTACG CCCTTTCTAT ACGTCGCCAA AACTACCCGG CATCCGGCTC ACTTTATTCT CTTTGCCTTG GCCTTTACGC TCTGTCGAAT TGTGTGGGTG CCCGTTCTTA GTTTGCAGCT CAAGCAAGCT GGGCGGGGTT ATACCGATTA CCTGCAACTC GCCTTGTGCG GCTTTTACTG TTTGAATCTG TTTTGGTACG CCAAGATCCT TCGCATTCTC TACGACGGTG CCACTGGCAA GATCGATAAG AAAGAGGTGT AA
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Protein sequence | MSNPLFLGLY KFWSVYNGDT SFLPLYLPLL FWVVSYTYCR FVRREFHKWT LLHSFHNFGA IVLGLISLYY DNDAVFSERL SILWSMAYFL VDIVDCIVRG DVAYTVHATF CLLLGVANYT TPVCRELRMN SKAALLECST PFLYVAKTTR HPAHFILFAL AFTLCRIVWV PVLSLQLKQA GRGYTDYLQL ALCGFYCLNL FWYAKILRIL YDGATGKIDK KEV
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