Gene PHATRDRAFT_38628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38628 
Symbol 
ID7203342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp563410 
End bp564081 
Gene Length672 bp 
Protein Length223 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182557 
Protein GI219124536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0250872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAATC CACTATTCCT CGGGTTGTAC AAATTCTGGA GCGTCTACAA CGGTGACACA 
AGCTTTCTCC CGCTCTATTT ACCTTTGCTC TTCTGGGTCG TCTCCTATAC GTACTGCCGT
TTCGTGCGAA GAGAGTTCCA CAAATGGACT CTTCTGCACA GTTTTCACAA TTTCGGGGCG
ATTGTGTTGG GTTTAATTTC TCTCTACTAC GACAACGATG CCGTCTTCAG CGAACGCCTT
TCGATCCTGT GGTCCATGGC TTACTTTTTG GTAGATATTG TGGACTGTAT CGTCAGAGGC
GACGTCGCGT ACACCGTGCA CGCCACCTTT TGTTTGCTAT TGGGAGTGGC GAACTATACG
ACCCCCGTCT GTCGCGAGTT GCGCATGAAT TCCAAAGCCG CCTTGCTCGA ATGCAGTACG
CCCTTTCTAT ACGTCGCCAA AACTACCCGG CATCCGGCTC ACTTTATTCT CTTTGCCTTG
GCCTTTACGC TCTGTCGAAT TGTGTGGGTG CCCGTTCTTA GTTTGCAGCT CAAGCAAGCT
GGGCGGGGTT ATACCGATTA CCTGCAACTC GCCTTGTGCG GCTTTTACTG TTTGAATCTG
TTTTGGTACG CCAAGATCCT TCGCATTCTC TACGACGGTG CCACTGGCAA GATCGATAAG
AAAGAGGTGT AA
 
Protein sequence
MSNPLFLGLY KFWSVYNGDT SFLPLYLPLL FWVVSYTYCR FVRREFHKWT LLHSFHNFGA 
IVLGLISLYY DNDAVFSERL SILWSMAYFL VDIVDCIVRG DVAYTVHATF CLLLGVANYT
TPVCRELRMN SKAALLECST PFLYVAKTTR HPAHFILFAL AFTLCRIVWV PVLSLQLKQA
GRGYTDYLQL ALCGFYCLNL FWYAKILRIL YDGATGKIDK KEV