Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38622 |
Symbol | |
ID | 7203530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | - |
Start bp | 549032 |
End bp | 549544 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182707 |
Protein GI | 219124849 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.197713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATG TGCAATTGAA CTATTTGCTT TGGCACAGTG CTGGTAGCGC CGGGGTTGTC TTGCTTGCCT ATGCCGGCCT TACCGCGGAA CCGCATCTCC GGGGACGATT CGATTTTTTG ACGAGATTGG TTCTTTCGGC GGCTTTCTCA TTCCTCATTG GGCTGGTTCT GGAGATCTTG AGTGTTCTGC ACGTTTGGCC TTGGTGTCCT TGCATTTTCG ATGGATGGGG ACTGTTTGTG AATGTGGACA GTATTCTTGC TACTGTCTTG ACAATCGTTC TCGTGAAAGT CACCTACTTT GCGAAAGGAA GTCCGTGGGA TTCAGAACGC TGCGCAGAGA CAATAGCATT GTCTGCGGAT GGCATGGAGA AAGATTTGGA GTTTGGAGAC GACGATGGAT GCTCGTCATC GACGCAGTCT GAGGATGCCG TCAGTGAAGC CCAGCCCGTC GTCGATTTTC TACCCGGACG ACAACTCGAA GCCGAAATCG GAAGCCACCG CCGTGGTGTT TAG
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Protein sequence | MTDVQLNYLL WHSAGSAGVV LLAYAGLTAE PHLRGRFDFL TRLVLSAAFS FLIGLVLEIL SVLHVWPWCP CIFDGWGLFV NVDSILATVL TIVLVKVTYF AKGSPWDSER CAETIALSAD GMEKDLEFGD DDGCSSSTQS EDAVSEAQPV VDFLPGRQLE AEIGSHRRGV
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