Gene PHATRDRAFT_38622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38622 
Symbol 
ID7203530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp549032 
End bp549544 
Gene Length513 bp 
Protein Length170 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182707 
Protein GI219124849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.197713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATG TGCAATTGAA CTATTTGCTT TGGCACAGTG CTGGTAGCGC CGGGGTTGTC 
TTGCTTGCCT ATGCCGGCCT TACCGCGGAA CCGCATCTCC GGGGACGATT CGATTTTTTG
ACGAGATTGG TTCTTTCGGC GGCTTTCTCA TTCCTCATTG GGCTGGTTCT GGAGATCTTG
AGTGTTCTGC ACGTTTGGCC TTGGTGTCCT TGCATTTTCG ATGGATGGGG ACTGTTTGTG
AATGTGGACA GTATTCTTGC TACTGTCTTG ACAATCGTTC TCGTGAAAGT CACCTACTTT
GCGAAAGGAA GTCCGTGGGA TTCAGAACGC TGCGCAGAGA CAATAGCATT GTCTGCGGAT
GGCATGGAGA AAGATTTGGA GTTTGGAGAC GACGATGGAT GCTCGTCATC GACGCAGTCT
GAGGATGCCG TCAGTGAAGC CCAGCCCGTC GTCGATTTTC TACCCGGACG ACAACTCGAA
GCCGAAATCG GAAGCCACCG CCGTGGTGTT TAG
 
Protein sequence
MTDVQLNYLL WHSAGSAGVV LLAYAGLTAE PHLRGRFDFL TRLVLSAAFS FLIGLVLEIL 
SVLHVWPWCP CIFDGWGLFV NVDSILATVL TIVLVKVTYF AKGSPWDSER CAETIALSAD
GMEKDLEFGD DDGCSSSTQS EDAVSEAQPV VDFLPGRQLE AEIGSHRRGV