Gene PHATRDRAFT_38589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38589 
Symbol 
ID7203513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp465184 
End bp465723 
Gene Length540 bp 
Protein Length179 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182539 
Protein GI219124498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCGC CAATGCCTCC AGACGCTCAA ACTGTTTTCG CTCCGCAGGA AGAGCTGAAT 
GCTGTTCGCC GTCAAGCCAA ACTACTTGCT GATGATATAA AGCAAGCACT GGAAGAAACT
CTCTCGCAAC TAGCGCATAT CTCGAACGAA ACATCTCCTT GGAATGGTCG CGTCCCCCTT
TTTCGTTCGC AGTCAGCTAA GTGTCAAAAA CATCTTAATT CGCAGCGAGG CATGGAAAAT
TACGAACGAG ATCTCGATGA CGATACGGGA ACTCAGGTGG GCACACTATC AGACAGCGGG
GGTGACGATT ACTCGTCGCC CGATAGGGTC TTGAGTTTTA AGCAATATAG TGGTTTGGAC
TCGGGAAAGA AACGCAACCG CATTCGCTGC GGCATCCAAG TCCATGAGGA TAAGATTCGC
AGCATTTTAT CTCGGATGAA GCAACTGACG CATGCAAATG TGGGCTCTAC CAATGTTAAA
ACAGACCAGC GTGGCGATCA CGGAGATAGT AGTAGCATGA ACAGTTCGAA TAGTATTTAA
 
Protein sequence
MASPMPPDAQ TVFAPQEELN AVRRQAKLLA DDIKQALEET LSQLAHISNE TSPWNGRVPL 
FRSQSAKCQK HLNSQRGMEN YERDLDDDTG TQVGTLSDSG GDDYSSPDRV LSFKQYSGLD
SGKKRNRIRC GIQVHEDKIR SILSRMKQLT HANVGSTNVK TDQRGDHGDS SSMNSSNSI