Gene PHATRDRAFT_38534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38534 
Symbol 
ID7203294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp335402 
End bp336016 
Gene Length615 bp 
Protein Length204 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182514 
Protein GI219124446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.087492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCACG GATCGCAAGC ACTGCTACAG GCTGCGAAAC GCAAAGTCTC CGCTATCGCT 
TCTAACGCAA TCACCATGCG ATCGATTACT GTTGGAACCG ACATGATCAG TTCCGTGATT
TCCTTACAAA AGGCTCGTCC CTGGTACATG TCGGATGCGG AGGGATCCAA TATGGCCGAC
GACAATGCCG TGACGCTCAA AGATCTCTTT AAAAAACAGA CGGTTGCTCT TTTTGGCGTT
CCTGCGCCCT TCACTGGTAC GTGCTCAAAC GAGCACTATC CGGGATACAA GGCTCTGGCA
GACGACTTTC TACAGGCCGG TGTCGATCGC ATTGTATGTT ACAGTGTCGC GGATCCGTAC
GCCATGGACG GCTGGGCCAA AGCTTTGAAG AACGATGCCG AAAAGATCAC TTTCATGGCG
GACCCAGACT CTTTGTTTGC CAAGGCCTAT GGGTTGGACG CAGCGTACGA TGCGGTCAGC
CTGGGACAAC GGTCTATTCG GTTTTCAATG GTGGTCGCGG ATGGAAAGGT AGAGGCATTT
CACAAAGTCG ACGACGCGGT GAAGGATGCG GAGACCCTTC TGGCTGACGT CAAGGAATGG
AAAGATCATC AGTAA
 
Protein sequence
MMHGSQALLQ AAKRKVSAIA SNAITMRSIT VGTDMISSVI SLQKARPWYM SDAEGSNMAD 
DNAVTLKDLF KKQTVALFGV PAPFTGTCSN EHYPGYKALA DDFLQAGVDR IVCYSVADPY
AMDGWAKALK NDAEKITFMA DPDSLFAKAY GLDAAYDAVS LGQRSIRFSM VVADGKVEAF
HKVDDAVKDA ETLLADVKEW KDHQ