Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38534 |
Symbol | |
ID | 7203294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | + |
Start bp | 335402 |
End bp | 336016 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182514 |
Protein GI | 219124446 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.087492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCACG GATCGCAAGC ACTGCTACAG GCTGCGAAAC GCAAAGTCTC CGCTATCGCT TCTAACGCAA TCACCATGCG ATCGATTACT GTTGGAACCG ACATGATCAG TTCCGTGATT TCCTTACAAA AGGCTCGTCC CTGGTACATG TCGGATGCGG AGGGATCCAA TATGGCCGAC GACAATGCCG TGACGCTCAA AGATCTCTTT AAAAAACAGA CGGTTGCTCT TTTTGGCGTT CCTGCGCCCT TCACTGGTAC GTGCTCAAAC GAGCACTATC CGGGATACAA GGCTCTGGCA GACGACTTTC TACAGGCCGG TGTCGATCGC ATTGTATGTT ACAGTGTCGC GGATCCGTAC GCCATGGACG GCTGGGCCAA AGCTTTGAAG AACGATGCCG AAAAGATCAC TTTCATGGCG GACCCAGACT CTTTGTTTGC CAAGGCCTAT GGGTTGGACG CAGCGTACGA TGCGGTCAGC CTGGGACAAC GGTCTATTCG GTTTTCAATG GTGGTCGCGG ATGGAAAGGT AGAGGCATTT CACAAAGTCG ACGACGCGGT GAAGGATGCG GAGACCCTTC TGGCTGACGT CAAGGAATGG AAAGATCATC AGTAA
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Protein sequence | MMHGSQALLQ AAKRKVSAIA SNAITMRSIT VGTDMISSVI SLQKARPWYM SDAEGSNMAD DNAVTLKDLF KKQTVALFGV PAPFTGTCSN EHYPGYKALA DDFLQAGVDR IVCYSVADPY AMDGWAKALK NDAEKITFMA DPDSLFAKAY GLDAAYDAVS LGQRSIRFSM VVADGKVEAF HKVDDAVKDA ETLLADVKEW KDHQ
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