Gene PHATRDRAFT_38525 details

Gene Information

• Locus tag: PHATRDRAFT_38525
• ID: 7203485
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: -
• Start bp: 314367
• End bp: 316608
• Gene Length: 2242 bp
• Protein Length: 665 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002182658
• Protein GI: 219124747

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGAAG AGGAAAGCAA GAAGCGACCG CGAGACAACA TCGCCGAAAG CGAAAGTCTC 
AAGACGCCCA AACGCTTTTG GAATCGCGAA ATCCCCTCCA GCAGTCACTA TCACGTCTCG 
TGGTACGTTC GGTCGAGCCT TTTGGCTTCC GTGACATTTA TTTCTTCCAC ACCGTCTTGA 
TGTCAACTCA CAATCCGCTC TTTCTCTTTC CTCGTGGCAG GATGCACGCA CAGACGCTGA 
CGGCGGTCGT TACTTCCACC AAATACGGCT ACGTCGTCTC GGCTTCACAG GATGGTACGG 
TCAAGTTTTG GAAGCGTCTC GAAGTCGACG GTGAGCCGGT GGAAGGCCAA CATCCCTGTC 
TGGAGTTTGC CAAGTCATTT ACAGCCCACG CAGGTCCCGT GCTCGCACTC GCCATGGATC 
CCGACGAAGG AGTTTGTGCC TCCGTGGGGG CCGATAACGT TATCAAGTTT TACGACGTCA 
GCACATTCGA CGCGACCGCC ATGATACGTA CGGAACGACC GCTCGGTACG GCGTGCTGTT 
GGTTACGCTC GGCGAATCGG AGTGAAACCT TGTTGGCGGT CGGTGCCGCC GACACGGGGG 
ATATTTATCT CCACGCACCC GACAGATCGC GTGTCGTTCA AACATTAACG ATGCACGGGT 
CCAATATTGT CACGTGCCTG GCCTACAATG CGACACATCA TTGCGTAGTT TCAACCGATC 
AAAAAGGAAT TATAGAAATA TGGGATTCTT GGGGGACTCC GGATGTATCG GAAAGAACCA 
GCGACGCAGA TGAAGGCACT GAGGACGAGA AATTTGCCTT GCTTGTGGGA GGACCTCTGG 
TACCGAGCCG ACACGGCATC GTCTACGGAT CGAAAGTGGA TACTCAGTTG TACGAACTTG 
TTCGCAAAAA GACCTTTGCC ACTGCTATTG CCATTGAACC GACGGGTGAG CATTTCGCAA 
TTTACGGATC CGATCGGAAA ATTCGTATTT TCGAACACCG TACCGGGAAA GTTCGCGTCA 
CGTACGATGA ACGCCTCAAG GCATACGACC GCATTTTTGG AAACTCGCCG TTCCATCTCG 
ATACCATTGA ATACGGACAA CGAGCGGCTC TGGAACGGGA AATGGATGCC GAATCGACCG 
TGTATTCGGC TGGCATGGCA CTGTCGAAGA GCGCACCGGT TGGATGTGCG CCACAACGCA 
TTGCTTTCCA ATTTGATGGC AGCGGCAAAT ACCTGCTAAT TCCGGCACTC GTGGGTATTA 
AAGTGATTGA GTGGAGAAAG AACAAGCTCG TCAAAATGAT TGGGCAGGCT GATGCGAGCC 
AGATGCGCTT CCTCTCAATT TGCCTCTGTC CGGGTGATGC CAAAGTAAAT CGTCAGTTGC 
AGCTGTCCCG CAATGCTAGC AAAAAGACCA GCGCCGCGAC CGAAGCGGAT GAAATTGAAC 
GTGCCAGTGA TGTGCTGTTA GTAGCACTAG CTTACAACCA GCGGCGCCTA TATGTGTTTA 
GTCAGCTGGA TCCGGTGGAC GATCGGGATG CGCCAGACAA TGTGCTGGTA CGGAGAGACG 
TTTGGAACGA AGCGCCATCC GGTCAGGATC AAATCCATAC CGAAAGTCGG CATACGAACA 
CTACATCCCA AGCTTCTCGA GCTGTCATAC GGACGACTCT GGGAGACATA CATCTGCAGC 
TATTTTCGCA AGTACCCAAG ACGATTGAGA ACTTTGTTGG GCATGCCAAG TCAGGCTATT 
ACGACAATGT CATCTTTCAT CGAATTATCA AAGGTAAGTT GTCGACCAAC AACTAGTTCT 
TGGACTCTTC CAGAGCCTGT CTGCCACGCT AAACGTAACT CAATTTTCTG CTTAGGTTTT 
ATGCTTCAGA CTGGAGATCC ACTGGGAGAC GGTACCGGAG GGGAAAGTAT TTGGGGTGGG 
GAATTCGAAG ATGAGTTTGT GCCCGGTTTA CGGCATGATC GTCCTTTCAC TTTGTCGATG 
GCCAACGGTG CGTTTTGCAG CACTCTCTCC TTGACAATTA CGATGTTTAG ACTGACGCGT 
TTTTTGAACA GCTGGCCCAA ACACCAATGG ATCTCAATTT TTCATTACGA CAGTCCCTTG 
TCCGTGGCTA GATAACAAGC ATACAGTATT TGGACGGGTC ACTCGCGGCA TGGACGTGTG 
CACGGTTATT GAGAATACAA AGACGGATGA GTCAGACAAG CCTCTTGCGG ACGTTCAGAT 
CCAAAGTATT GACATAGAGT GA 

 

Protein sequence

MPEEESKKRP RDNIAESESL KTPKRFWNRE IPSSSHYHVS WMHAQTLTAV VTSTKYGYVV 
SASQDGTVKF WKRLEVDGEP VEGQHPCLEF AKSFTAHAGP VLALAMDPDE GVCASVGADN 
VIKFYDVSTF DATAMIRTER PLGTACCWLR SANRSETLLA VGAADTGDIY LHAPDRSRVV 
QTLTMHGSNI VTCLAYNATH HCVVSTDQKG IIEIWDSWGT PDVSERTSDA DEGTEDEKFA 
LLVGGPLVPS RHGIVYGSKV DTQLYELVRK KTFATAIAIE PTGEHFAIYG SDRKIRIFEH 
RTGKVRVTYD ERLKAYDRIF GNSPFHLDTI EYGQRAALER EMDAESTVYS AGMALSKSAP 
VGCAPQRIAF QFDGSGKYLL IPALVGIKVI EWRKNKLVKM IGQADASQMR FLSICLCPGD 
AKVNRQLQLS RNASKKTSAA TEADEIERAS DVLLVALAYN QRRLYVFSQL DPVDDRDAPD 
NVLVRRDVWN EAPSGQDQIH TESRHTNTTS QASRAVIRTT LGDIHLQLFS QVPKTIENFV 
GHAKSGYYDN VIFHRIIKGF MLQTGDPLGD GTGGESIWGG EFEDEFVPGL RHDRPFTLSM 
ANAGPNTNGS QFFITTVPCP WLDNKHTVFG RVTRGMDVCT VIENTKTDES DKPLADVQIQ 
SIDIE