| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38511 |
|---|
| Symbol | |
|---|
| ID | 7203479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011684 |
|---|
| Strand | + |
|---|
| Start bp | 279199 |
|---|
| End bp | 279981 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182505 |
|---|
| Protein GI | 219124427 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.110991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGCG AACGGACGAA TACCGGCGGT AGCAGCAGTG CAGCCGGCAT TCCCGCTGTC
GCCTCTTTGC GAGAACGCAC CAACACTGGA GGTTCTATGC GTTCAGTTGA GAGCCAGGAT
TTGGAATCCG TCCGTCTTAT GTCGCCTCGG CGGTACAGCA ACAATTTGGC ACCGAGCCCT
TTGTCGAAGA ACTCAATGTC AAACGTTGCA ACTCGACGTC GTAGGATTGT CGACTGGATT
CAAACACAAT ACATTCCGAA AGCATTTACA CGACAGAAAA CGCAAGTAGT GCCCTGGGTT
ACAGGCTTGG ACCGAGTTGT CTTTGGTTCG ACGAGTGCTG CGGAAGCTGT TACTATTGCT
GGGATACAAC CCCCAAGGTA TCTTTGGTAC ATGATCAGTG GTTTCCTTTG CGACATCTTG
CAGTTCACAT TTGACTTTTT CTTGTACCAC GCTTTCAAGG TGAACGACGC TTCTCTTTGC
TGGGCCTTGA GTTTCTTCAT CTCCATTGTA TTTCGGCATA CGTCGCATCG TTATCTTGTT
TTTGGCGACT ATATTGGTGG ATACTGGGCA AGCCTAATTC GAATGTACGC CGGCTATTCC
ATCATTATCG TACTGAGTAC GATCTTCAAT GCTCTTGTCA CTAAAGTCTG GCATATTTCC
CACGGTATTG CGTGGGTATC AACGTTGCTG TGGACAGGGA TTGCAAATTA TTTTATTTTG
AAAAAGATTT GGAGTTTTGG AGGATCCAGT AGCGGAACGC CTGTATCACA GAATCGGGTG
TGA
|
|---|
| Protein sequence | MSRERTNTGG SSSAAGIPAV ASLRERTNTG GSMRSVESQD LESVRLMSPR RYSNNLAPSP
LSKNSMSNVA TRRRRIVDWI QTQYIPKAFT RQKTQVVPWV TGLDRVVFGS TSAAEAVTIA
GIQPPRYLWY MISGFLCDIL QFTFDFFLYH AFKVNDASLC WALSFFISIV FRHTSHRYLV
FGDYIGGYWA SLIRMYAGYS IIIVLSTIFN ALVTKVWHIS HGIAWVSTLL WTGIANYFIL
KKIWSFGGSS SGTPVSQNRV
|
|---|
| |