Gene PHATRDRAFT_38508 details

Gene Information

• Locus tag: PHATRDRAFT_38508
• ID: 7203477
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: +
• Start bp: 273386
• End bp: 275482
• Gene Length: 2097 bp
• Protein Length: 578 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002182503
• Protein GI: 219124423

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATGA CACCTGTCCA GCCTACGCCG ATCACCCGCA CTCCAGACAT TGCCTTTCTA 
ACAAACGGTC TTGTAGAATA AGACCAAGAG AAATATCAAG CGACGAAGAG AATTTTGCAT 
AATTGATCCG TTTGTGCTCG GGTTTGGGTC TTCGTGCTTC GAGGAAAACA AACCGGTGAT 
CAACTGGTTG GTCTATCTAC ACGAACTGTA TCATTTGTGT GGGTGGCAGG CCCGTGTCGA 
CGACATTCTA AGCTGCTCAG CCACATTCGC GCTAAGCAAC TCAAAACCAT CTACTCACTG 
ATATATTCCG ATAAGTGCTA TTACTGTAAT CTTAATCGCT GTCGACGTGA AACCACGCAC 
ATCCAACGAA TTGAAATGAT GCGATCAAGG AGGAAACGAC GTCAAACTAC AACGACAAAC 
TTTCTAGCAA AATTGACGCC TACGTTCTTG CCCCTTATGC TGCTTTTTTT GTCCGTGCTT 
TTGACTAAGG GCTTTCCGAT AGTAGCACAA ACCAAACCCG GTGGTGGTGC GACGAGTAGC 
GGTGGCCAAC AATCAATACC ATGGAAACTC TCCCTGAAGG CAGACAATTC AAATGAGGGC 
GAACCCGCCA ACAAACCCTC CGGTTCTCGG AAAAGACGAG GACGGAAAGT CAACGGCCAC 
GACCCGCACG ACCATTATTC ATCTGGGAAT TCAACCGCGA CTGCTCCTGC AGAAGCAGTA 
GCCGAGTCAA ACAAAAATAA AGAAATGATG GAAGGCTTGC TCAAGCGTGT GACTCAACTT 
GAGCAAATGG TCGCTCGGCA GTCGGTGGAG GTTAGACGTC TCAAGGAAGA GTGCAAGGAT 
TTGACCGAAG CGGCTGCAGC TTTTGCTCGT GTGGTGGAAC TGTTGCGGGA TGCTGGTCTT 
CAAACAGGTG GTAGCCCTAA GGACCTGCAA CAAAAAGAGG TTGATGACAA GCAGGCTGCA 
ATGGAAGCCA ATTCAGAGAA ACGGATCATT GAGTATTTTG ACGACTCAGA AATCCTCGGT 
AAGGCGCCTG CTTCCGTAAT CGAAGCGGCG GACGCCGCGG GTTCCGCCAT CCTGGCCATG 
ATGCTAGGCG GCAAGCAACG TATGTTAGTT GACGTGCGAG ACGCCGAGCT TTCTCGTGAT 
CCCGAGACGC TGGTACAATT CATCGAGCTC GCCATTTTAC CCGTCGCGGC CGGTTTGGAA 
GGTCTCAAAT CACAGCGGAA CCGGCTCAAA ATTGTTTTTC CTACTGTATC CCAACTGCTA 
GTCTATCGGA AGACTATGGC ATTGGCAGCG CCAGAAGTAG TTGCGTTGAG CACATTTGGA 
TTAGAACCAG TCGAAAAGCA GGATAATTTG GTCGTAATCG TTGCGCCCTC ACCTGATGAC 
GAAGAAGGTT TGATGGCGAT GAACGAACTA CTGCATCCGA CGGATCCCAA CAGAATATCG 
ATAAAGCAGC CAGTGGTTAT TTTAAATCAC CATATGGTCC CCATTTCTGG ACCTGTCGCT 
GATTTTGAGG TAGCTTACCA CTTAAGGCTT CTATCAGTTC AATACATGTC CGGTAATGAC 
GGTGCAGCGC AGGAATACTT CAAGCAGTTT GAAGGATCCG CTCCTCCATT ACCTGTAAAT 
ACGCCGAGAA ATGAGACCGG CGAGAAAGAT TCCGCGGCCG ATGCAAACGC CACAACAATA 
GCTGACACAG ACGATTTTGA TCGTCCCGGT GACGCCTTGT TGGAAGCTGC CATGGAGCAT 
GCCCAACAAG TTGGTATGTC GCAAGGAGTG ACTAGGGCCA TGGTGATACG GGCCTATCCT 
AAACCGTGGC ACGTCTTTGT CGATACATCG CCTGGCACCG ACGCAGACTT TGTTGTGGCG 
GCGACCTATG ACAACGAACC GTCACCACAA GAAGTCAATA TAGCGATTGT GGAGTGTCTA 
GAGGGCAGCG AGCGGGAAGA TGAGCTAGTG GCACAGCAAA TGCAGGAAGC TCTTGAGTCG 
GGACAATTGG ATAGGGTCTC GAAGATGTTG GAAATGCTGG ATTTGGAAGA CGGTGAAGAA 
GACGAAGATG ATGAAGGTGA CAGCGCTTGG GGTCTCTTTG GCGAAGACAC TGTTTGA 

 

Protein sequence

MAMTPVQPTP ITRTPDIAFL TNAKLTPTFL PLMLLFLSVL LTKGFPIVAQ TKPGGGATSS 
GGQQSIPWKL SLKADNSNEG EPANKPSGSR KRRGRKVNGH DPHDHYSSGN STATAPAEAV 
AESNKNKEMM EGLLKRVTQL EQMVARQSVE VRRLKEECKD LTEAAAAFAR VVELLRDAGL 
QTGGSPKDLQ QKEVDDKQAA MEANSEKRII EYFDDSEILG KAPASVIEAA DAAGSAILAM 
MLGGKQRMLV DVRDAELSRD PETLVQFIEL AILPVAAGLE GLKSQRNRLK IVFPTVSQLL 
VYRKTMALAA PEVVALSTFG LEPVEKQDNL VVIVAPSPDD EEGLMAMNEL LHPTDPNRIS 
IKQPVVILNH HMVPISGPVA DFEVAYHLRL LSVQYMSGND GAAQEYFKQF EGSAPPLPVN 
TPRNETGEKD SAADANATTI ADTDDFDRPG DALLEAAMEH AQQVGMSQGV TRAMVIRAYP 
KPWHVFVDTS PGTDADFVVA ATYDNEPSPQ EVNIAIVECL EGSEREDELV AQQMQEALES 
GQLDRVSKML EMLDLEDGEE DEDDEGDSAW GLFGEDTV