Gene PHATRDRAFT_38448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38448 
Symbol 
ID7203429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp121631 
End bp122092 
Gene Length462 bp 
Protein Length153 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182477 
Protein GI219124369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000115134 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTTG AAACCGTGAC CAAATTGGAA CCAGTAGATG CTTCCGTTAT TGAAGCCGGC 
AAGAAATTAG CGACAGGTAT TTTCTTGACC AAGGATATTG TCAACGCCCC GCACAACGTC
TTGAACTCGC TTTCGCTTGC CGAGACAGCT AAGCGCATTG CCGAGCAGAA CGGTGGACGG
ATCATTTGTG AAATCCTCGA CAAAGAGGCC TGTGACGCCC GCTGTATGGG TGGCTTCCTT
GGAGTAGCGC GCGGCAGCGA AACGCCTCCT CAGTTCATCC ATTTAACCTA CACTCCACCC
TCGGGAAAAA TTTCCAAGAA GGTCGGAGTC ATTGGGAAAG GCCTCCTCTT CGACACGGGC
GGCTACAATA TTAAGACCGC CATGATGGAA CTCATGAAGT CTGCACTGAA ACACCGCGTT
GGTCGATTTT CCAAGGTCCT GTACTTTTTA CTGAGCACAT GA
 
Protein sequence
MAFETVTKLE PVDASVIEAG KKLATGIFLT KDIVNAPHNV LNSLSLAETA KRIAEQNGGR 
IICEILDKEA CDARCMGGFL GVARGSETPP QFIHLTYTPP SGKISKKVGV IGKGLLFDTG
GYNIKTAMME LMKSALKHRV GRFSKVLYFL LST