| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38427 |
|---|
| Symbol | |
|---|
| ID | 7203443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011684 |
|---|
| Strand | + |
|---|
| Start bp | 70826 |
|---|
| End bp | 71701 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182468 |
|---|
| Protein GI | 219124350 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTAG TGCAAAAAAA TGCTGCTGCC TTCTGGTTGC TTTTGACCTC CGGTGTCTGG
AGTCTGCAAA GTGTTCCAGC TGTAGAAAAA TGGGCCGTTC CTATGAGACG AGAGCCACCA
AAATACACTC AGCCCCAATG GTGTTTCAAT TCTGATCCAA TTTATCAAGC TTTTAAGAGA
GGAGAGGTAC CCTTGGTTTG CTTTAAAAAC GTGCTTTCAA AAGTTCTGTT GGAGTCACTA
CGATCTGATG CTACAGCGTT ACGATCCGCA GGGTTTGGAG CAACTGCTGG AATCGCTCAA
GCTGCCGACG GTATTTCAGA TGAGGTACGA CGCAACGTGC ATCAAGTTTG GTTGCAGTCG
CCCGGGCAGC GTCCTCAAGA AGCCTTTTGT GGAGATATTG ATGCACGAAA AAAACTTTTG
TCTTTTGTTT CTGAGCTTAG GCTTGACTTG GCAGCCTTGC CGAAATACGA GAGTTTGGTG
CCGGGGGGGA TCGAACTCAG CTACCTTCTC TATGAGCCGG GCTCCTTTTA CAAACGACAC
ATTGATTCGC CAAAAGTTAG AGATAGAGAG GGAAATGTAA TGGTAGACAA ACGAGCTGTT
AGCATGATTT TATACCTTGG CGACGCTCAC GAGAACCGAG ATTGGGACAT CTCAATAGAT
GGTGGTGCCT TACGAATCTA CGGTAACGAA AATGTTAAAT GCAGACAAGC ACAAGAGAAA
GGTGAGGGAC GTTTACAGTT AGACGACTAT CTCGACATTG TGCCGGAGCG TGGAACGATG
GTGTTGTTCG AGTCAGAGCA AGTCGCACAC GAGGTACGAC CTACGGAACG CGACCGTATA
TGTGTTGCAG GATGGTTTCG CCACCGATCA TGTTAG
|
|---|
| Protein sequence | MPVVQKNAAA FWLLLTSGVW SLQSVPAVEK WAVPMRREPP KYTQPQWCFN SDPIYQAFKR
GEVPLVCFKN VLSKVLLESL RSDATALRSA GFGATAGIAQ AADGISDEVR RNVHQVWLQS
PGQRPQEAFC GDIDARKKLL SFVSELRLDL AALPKYESLV PGGIELSYLL YEPGSFYKRH
IDSPKVRDRE GNVMVDKRAV SMILYLGDAH ENRDWDISID GGALRIYGNE NVKCRQAQEK
GEGRLQLDDY LDIVPERGTM VLFESEQVAH EVRPTERDRI CVAGWFRHRS C
|
|---|
| |