| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_29423 |
|---|
| Symbol | |
|---|
| ID | 7203366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011684 |
|---|
| Strand | + |
|---|
| Start bp | 668179 |
|---|
| End bp | 670617 |
|---|
| Gene Length | 2439 bp |
|---|
| Protein Length | 669 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182580 |
|---|
| Protein GI | 219124584 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.929272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCTGCTCAAA GAATGCGTGT TGGTTGCAGT GCGCGCCATT GGACGACTGC AGCTGCCGCC
TTATCTACCT TGGGTTTCGT TTCCTTTCTA CCTTCCTCGT TAATCCTGAC GACAAGTGCT
ACGACTGCAA CTACAGCTAT AGCCTTTACC CCACCCTTTG GCATTCCGTA TCGCTGGCAG
TACCACAACT CCCCGCCTGG AAATAGTATG AGTACGCATG CACGTAGTGT GAGCACCACC
GTCAGGGCCA GCAGTAGTGG TGCACCTGCT ACCGATAAAG ACAGCAAGGC TTCGACGACT
CCCTCGATAC TGCGTGACGT CCAAGCAGCG TTGGAAAACT CTTGGGTTCG TCAGCTTTCG
CCCGAAACTG CCGAGAATTT GAAAAAGTCA CGGAAAGCGG AAGGGTTGCC CGATACCGAC
GATAATCGTA CCCGGCGTCC CGTCTTTAAC GGTCATTACG TCCCGGTCAA ACCGACAGGG
ATTGCCAAAC CCCGTCTCGT AATGTACAGT CCCGACATGG CGGCACAATT ACAACTTACA
CCCGAACAGG TTGCATCGCC AGACTTTGTC GATTGGGTGT CCGGTAATAC AGTCTTGGGT
GAAACTTGGG CGACACCGTA CGCGCTCTCC ATTATGGGGA CTCGCTACAC CAACAACTGT
CCCTACGGAA CGGGCAACGG CTACGGCGAT GGTCGCGCTA TATCTATAGG TGAATTGCAC
GGTCTCGAAC TTCAGCTCAA GGGTGGTGGC ACCACGCCTT TTCATCGCGG TGCTGATGGC
CGCGCCGTCT TGCGGTCCAG CATTCGAGAA TTCCTCGCCA GCGAAGCCAT GCACTCGTTG
AATGTTTCGA CTACCCGGGC ATTGTCGTTG GTCGTCAGTG AGCTCGACAC GATCTCGCGT
CCTTGGTATT CGGACAATTC CGTCTTGCGC ATACCAGATA TGGATGATCC CCGCTTGGCT
CAATACGATA CGGAAGAGCG CAAACGAATC ATTCAACAAC TCAAGGCCCA ATCCAAGGCT
GATCCCAATA TTATGGTCCG AGAAAAGACC GCCATTACGT GTCGTGTAGC GACCAGTTTT
CTCCGCGTCG GACACCTCGA TTTGTTTGCC CGTCGAGTAG AGCGCACCAG TAAAAACACC
GACGGTACCT ACGACACCTC CACGTTGGAG TGGAAGGAGT TGGAGGATCT CGTTTGGCAT
GCGTGCTATC GTGAATATCG GCACGCTGCG TACGAACCCT TTCACGAAAC ACGTGATATT
GCCGCGGCTG CTCACGTTTT GTTGAAACAG GCCGCCGACC GCATTGCGGC CATGGTCGCC
GATTGGGTCC GTGTTGGTTT CATCCAAGGC AATTTTAACG CGGACAATTG CCTCGTGGGT
GGTCGCACCA TGGATTACGG TCCCTTCGGC TTTCTCGAGT ACTACCATCC CACGGCGGCC
AAGTGGACCG GTAGTGGCGA GCATTTTGGT TTTTTGAACC AACCGTCGGC TGGCTTTGCC
AATTTCAAAG TGTTGGCAGA AAGTGTGGTT CCCGTGATTG CAGCCGCCCA CGGTGAACCG
TCGAGTAAGA TTCTAAAAAA TGTTTTGGAT GATGCCGCCA AAGTATTCCA AAACAAGGTA
GACGAGACAT TTCGGAAAAA GCTGGGTTTT ACTGTCGAGC AAGATATCGG CGATGACGTT
TGGGAAGCTT TGGAACCGTT GTTGCGACTT TCGCAAATTG ACTGGACCCT CTTTTTCCGA
CAATTGACTA TGCTGCTAAA GGACTTTCCC GATTTGTCGT CGGAGGACTA TGTTGGAATG
CTCTGCGCCT TGGAGGGGAG TGATACCGAC CGCGAAGGAT CAAGTCCGTT CTATGAACCA
TTGACGCAAC AGCTTCGTGC GCGGTGGTTA ACATGGATAG AGCAGTGGAG AGTTGCACTT
GATGCGTGTG GATCCGATAC CGATACAATT TTTGAACAGA TGCGAACGAC CAACCCCAAG
TTTGTGCTCC GCGAGTGGAT GCTAGTCGAT GCGTACACAA GGGCGGCTGC CGGCGATGAA
TCTGACATGA GGAAGCTCTT TGAGCTGATT CAGCGGCCGT ACGACGAGGG AACAAAAGAT
GAAATAAATC GATTTTACCG ACGAGCCTCG GAAGAAGCAC TTACGACCGG TGGGACCGCC
TTTATGTCCT GATCCAGTTA AGCGCAAAAA ATGGTGTGAC TTACATTGAC TACACAAATT
TCTCAGTCCG TCACACATGT CCTTGCGCGA ATATAAATGC ATTGAAAACA AAAAGAAGTT
GCGCTTACAC AGATCAGAGT GAATGAAAGC AAGAGGAAAA TCCATGTCTA AAGCGAAGAA
TGAAAGCCCT TGCTCGACCA ACCTGATAAC AACTGTGCAA ATTAGCAACT GACATAAAAC
GCATCCTCCA TCTAACATCT GAAACCGGCT CAATTCTAT
|
|---|
| Protein sequence | MRVGCSARHW TTAAAALSTL GFVSFLPSSL ILTTSATTAT TAIAFTPPFG IPYRWQYHNS
PPGNSMSTHA RSVSTTVRAS SSGAPATDKD SKASTTPSIL RDVQAALENS WVRQLSPETA
ENLKKSRKAE GLPDTDDNRT RRPVFNGHYV PVKPTGIAKP RLVMYSPDMA AQLQLTPEQV
ASPDFVDWVS GNTVLGETWA TPYALSIMGT RYTNNCPYGT GNGYGDGRAI SIGELHGLEL
QLKGGGTTPF HRGADGRAVL RSSIREFLAS EAMHSLNVST TRALSLVVSE LDTISRPWYS
DNSAQSKADP NIMVREKTAI TCRVATSFLR VGHLDLFARR VERTSKNTDG TYDTSTLEWK
ELEDLVWHAC YREYRHAAYE PFHETRDIAA AAHVLLKQAA DRIAAMVADW VRVGFIQGNF
NADNCLVGGR TMDYGPFGFL EYYHPTAAKW TGSGEHFGFL NQPSAGFANF KVLAESVVPV
IAAAHGEPSS KILKNVLDDA AKVFQNKVDE TFRKKLGFTV EQDIGDDVWE ALEPLLRLSQ
IDWTLFFRQL TMLLKDFPDL SPFYEPLTQQ LRARWLTWIE QWRVALDACG SDTDTIFEQM
RTTNPKFVLR EWMLVDAYTR AAAGDESDMR KLFELIQRPY DEGTKDEINR FYRRASEEAL
TTGGTAFMS
|
|---|
| |