Gene PHATRDRAFT_29381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_29381 
Symbol 
ID7203516 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp476793 
End bp477994 
Gene Length1202 bp 
Protein Length329 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182542 
Protein GI219124504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.575053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGATTTACGT CGTACCATGA AAGGGTGCTC CATCGACGGA ATAAGAGCAT TAGCTTACTG 
TTAATCGCAA TCTTTCCTTG CAACGCAGAA GCGCCTTACT TCCAGTTTCT GCACTCCAGC
GCGCTCGACT ATCAATGGCA AGAAACATGT TGACAGAAAA TGAAAAGACA ACGATTCGGG
CAAGGGCAAC AGAAACACTG ATAGCTTTAG AACTTGACGC CAGTCGAGAC CCCCAAGCGT
CTTCATGGCT GAACAAAGCT CTCCCCGCAT CGCGATCTGA GCGATGCCAG TATTTTGATA
CTGAAGGATT TTTGCACAAT CCAGCATTTG CCACAGACTC GGAATGTGCT GCAATGAAAG
AACAAATGAG AGACTTGGTG GAATCGTGGG ATCCGTCGCA AGCCCTGGAC TCATTCGGGA
CCGACGATAA GCAGAATTCC AAAAGAGGCG ACTATTTCCT AGATTCTGCA GACCAAGTGC
ATCATTTTGT TGAGCCCGAC TCTCTAGACG AAGATGGGTT GCGCCTGAAG CCGGAGAATC
AATCGGACAA ACTCACTGCT CTCAACAAAT CAGGTCACGC CCTGCATTTG ATGCCAGGGG
CATTTCACGA CTACTGTACA TCCGAAAAGG TTCGGTCGCT TGTTACCGAG ATGGGATGGA
AGGATCCGGT CGTGCCGCAG AGTATGTACA TTTTCAAGCA AGCGCGAACG GGGGGAGTGG
TCAATTCACA CCAGGACAGC ACGTTTTTGT TCACGACTCC TCGACAGTCC TGTCTCGGTC
TGTGGCTGGC TTTGGACGAT GCAACACTAG ACAATGGGTG TCTATGGGTT CGACCTAAAT
CGCATAACGA GGCCACTCGG AGACAGTATA AACGCAACAC CAAATACTTT GGCTTGGAGT
CAATCCAAGC CCGAAGCAAC GAGTGCACGG GGGATTCTTC CGAGCAAAAA TTTCTTATGG
AGACACTGCA TGACAACAGC ACTGATTGGG AAGGTGCTGT TCCCGCAAAC GGCTGGCAAG
GTTTGCTAGA CGAAGGTTTT GTTCCAATTG AATGCAGGAC TGGCGATTTG TTAGCCTTTT
GTGGCGAACT CGACCATCTT TCACTTGCAA ACCAAAGCAG TCGTCCACGA CACACATTCC
AACTTCATCT GGTCGAAGGT CCAGAGGCGG ACGTAATATG GTCTCCTTTC AATTGGCTAC
AG
 
Protein sequence
MARNMLTENE KTTIRARATE TLIALELDAS RDPQASSWLN KALPASRSER CQYFDTEGFL 
HNPAFATDSE CAAMKEQMRD LVESWDPSQA LDSFGTDDKQ NSKRGDYFLD SADQVHHFVE
PDSLDEDGLR LKPENQSDKL TALNKSGHAL HLMPGAFHDY CTSEKVRSLV TEMGWKDPVV
PQSMYIFKQA RTGGVVNSHQ DSTFLFTTPR QSCLGLWLAL DDATLDNGCL WVRPKSHNEA
TRRQYKRNTK YFGLDTDWEG AVPANGWQGL LDEGFVPIEC RTGDLLAFCG ELDHLSLANQ
SSRPRHTFQL HLVEGPEADV IWSPFNWLQ