Gene PHATRDRAFT_2607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_2607 
Symbol 
ID7203336 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp540008 
End bp541204 
Gene Length1197 bp 
Protein Length370 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182553 
Protein GI219124527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCAACCAAG GGGACTACGA TAAACGAACG GCTTTGCACT TGGCATCCGG CGAAGGACAC 
GCATCGATCG TGCTGGCCCT TTGTGAGGCC GGCGCCGATC CCAACGTGGA AGATCGCTGG
AAGCGACGTC CTCTCGATGA CGCTTTTGCC GGCGGGACGG ATGGAGCCTA CGAAGAATGT
GTCGCCATTC TCCAACGATT TGGTGCAGCC AGGGGCTTAC AACGATCGAC AACTTCCAAC
GTAAATCTAG AACTCGACAA ATCCAGTAAG CGACAGAGCG ACAATCTCAA AATTAATTTT
GGTGAGCTCG AAATGATCGA CCGCATTGGC GCTGGCGCGT TTGGAGAAAT CTACAAATGC
CGTTGGCGTG GCACCTTGGT AGCGGCAAAA ATTATTAAAA CGGCTAAGAT TCGAAAAGAA
TGGGTCAATC GCCAAATTTC CGCCGCCATT AAGAAAGGAA AAGACGTGGA TGAAGCCATT
CACGAGCTGG ATGAAGCGGA AATGGCACAG AATGAACGAG ACTTGGCCAT TGCCGACTTT
CACCAAGAAA TATCGGTACT CAAGTCTCTA AGGCATCCAC AGATTGTGCT CTTGCTCGCT
TACTCAACCA CAGCAGACTA TGAAGTCATG ATTTCCGAGC TCATGAAGTG TTCCTTGCTG
GACGTATTCA AATCCCACAT GGTCCAAGGA ACGCGCATGC GGAAGCGAAC CCAAATTATT
TACGCGACAC AGCTAGCACG CGGCATGAAT TACTTGCACA CGTGTAGCCC TCCCATCATT
CATCGTGATC TCAAGCCTGC TAATTTGCTG ATCGACCACA GCGGAGTATT GAAGATCTCC
GACTTTGGCC TCTCCAAGAT ACGCCCCGAT CCAGGAAAGA AAGAAACGGA AAAGTATACC
ATGACGGGTG AGACCGGTTC CTACCGCTTC ATGGCTCCAG AAGTGTTTCG TCACGAAGAA
TACAACGAAA CCGTCGACAT TTATTCCTAC GCCATGATTT TGTTCTATTT GCTCGTTGGG
CGACCGCCGT GGCCTACCAT TTCGGGTATG AATGCAGTCA AAAAGGCCGC CGAAGAAGGA
GACCGACCTA ACGTTCCTCG AGATATGGAC TTGCGCATGC AAAGTCTACT CAAGGAATGC
TGGGATGAGA ATGCTTCAAT GCGACCAGCC TTTCAACGTA TTCTCGCCAA TTTGGAA
 
Protein sequence
VNQGDYDKRT ALHLASGEGH ASIVLALCEA GADPNVEDRW KRRPLDDAFA GGTDGAYEEC 
VAILQRFGAA RGLQRSTTSN VNLELDKSSK RQSDNLKINF GELEMIDRIG AGAFGEIYKC
RWRGTLVAAK IIKTAKIRKE WNERDLAIAD FHQEISVLKS LRHPQIVLLL AYSTTADYEV
MISELMKCSL LDVFKSHMVQ GTRMRKRTQI IYATQLARGM NYLHTCSPPI IHRDLKPANL
LIDHSGVLKI SDFGLSKIRP DPGKKETEKY TMTGETGSYR FMAPEVFRHE EYNETVDIYS
YAMILFYLLV GRPPWPTISG MNAVKKAAEE GDRPNVPRDM DLRMQSLLKE CWDENASMRP
AFQRILANLE