Gene PHATRDRAFT_22319 details

Gene Information

• Locus tag: PHATRDRAFT_22319
• ID: 7203397
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: -
• Start bp: 701999
• End bp: 704132
• Gene Length: 2134 bp
• Protein Length: 577 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002182745
• Protein GI: 219124928

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGTTGCTCTG TTCCGTATCA CCATCCTTTT ATTCTTGTTC CGCCTTTTAC CCGTCGACCT 
TGATCAGAAA TTTCCCTTGT TGTTCTTTTA GAGATACAAT CATGACCCTA GTCGCCGCAG 
GTACGAAATA ACGGCCCTTA GTATCTCCGC TATTCGAGGC ATTGTATTCA GTCTCTAATG 
CCACAATTGT ATACCTGGGC GGCTTTAGTT CCTCGTCGTG ATGCGTCATT TAAGAAGACC 
GTGTCAGCTG AAGACGGTCG TCGATCTCGG GAAGAGACAA CTTTGCATAT TCGAAAAAAC 
AGAATGGCCG AGCGCATGGC CAAACGTCGC ACAGCACCGA TGTCAAACCA AAGCACAGCC 
ATTGACAGCA ATATCGATAG TGCAGCCCAT CAACCCGTGC CAACCACTGC AAAAGAAATT 
GACATTGCTG TAGCTGGCTC TGTGCAAACT TTCCGCGCAT GGGAGGCAAA TCCTGCGTCG 
GTGAACGACG ATTCTCTAGC AGACGCCACC AAAGCAATTC GACGACTATT GTCAAAGGAA 
CGAAACCCAC CTGTTGTCCA GGTAATTCGA TCGGGAATTA TCTCTTTTTT GGTACGATTC 
TTGCAGGAGG ACAAAACTGA CGCTCCACGT TTGCAGTTTG AATCGGCATG GGCACTCACG 
AACATTGCTT CAACAAGTCG GACATCGGAT GTGGCCCATA GTGGTGCCAT CCCACATTTG 
GTCCGTATTA TCAATCATGC AGACTCAGCG GAGCTTCGTG AGCAAGCTGC TTGGTGCATT 
GGAAATGTGG CTGGAGACTC CATTGAGAAC CGAGATGGTC TCCTTGCCAC GCCGATGTTG 
ACCAACGGTA TGTTGAAAAA TATATCTCGT CCAGCGAACC TCTCGCTACT GCAGAACTTT 
ACCTGGGCAA TTTCCAATTT ATGTCGATTT AAACCATCTC CCGATTTTGG TGCTGTTGCT 
CCTTTTATAA GTGCATTGGT AAACATTCTC AATGAAGTTG AGAATGGTGT CGGTGCCGAA 
AGCGCCGTAG ACCTACAGAC GGACACACTC TGGGCGCTAT CGTACTTATC GGACGGCGAC 
GACGCTCGAA TCAACGCGGT TCTTGAAGCA GGTGTGCTCA AGCTTTTGAT GAATATTTTT 
GACAATGATA GTGTTCCTTC CAATACCCTC TTGCCGGCCG TTAGAGTGAT TGGGAATTGT 
GTGTCAGGAA GTCATGCTCA AACTGACGCG GTGATCCGTG CAGGTTTCAC CGAGCGGGTA 
GGAAAACTAC TCCATCATCC ATCGGTGCGT TTTTTTTCTA GCTTTATCTG TACCATTTAT 
GAACACCCTA GAAACTCACT GGTCCTGTAT TGTTTAACAG AAAACTGTTC AAAAAGATGC 
TTGCTGGGCG GCGTCAAACA TCGCTGCCGG AACCGAAGTG CAGCTTAATG CACTTCTTGC 
TGCAGAGCCT TTGAATGGAA TTCCAAAGCG AATTATTGAG ATGGCAATTT ATGGGAACTT 
TGACATTCGG CGCGAAGCTG TGTACACGAT TTCAAACATT TTGACAACAG GGCAGTTTCA 
TGAGACAAAA ATCATGGTGC AGGAGGAAGC TTTGAAAGCT TTGTCGAGCA GTCTTGAGCT 
GAAGCAAGAT TCTCGTATGT TGATTGCAGC TATGGAAGCC TTGGAAACAA TTTTCGAGTA 
CGACGCAAAG TTCAATCAAA ATTACTGTGT CCTTTTCGAT GAAGAAAAAG GTATTGACAA 
GCTGGAAGAG TTGCAGCAGC ATTCTATAGA CGAGGTCTAT GAAAAGGCCA GTGCCATCAT 
AACACTCTAC TTTGGAGTAG AAGACGAAGA TGATTTGGAT GAGAATATGG TGCCGAATGA 
GAATGGTGAC GGAGAGCTCG CCTTCGGCTT TCCAAAGCAG CTATTTCCGG AAAACCAACA 
ATCCGGTGCC CCGACGTTCG ACTTTTCAGA TGTCGATACA CAAGGGTCGC CCGCAATCCT 
GGGACAAATT CAGCGTTGAA TATCTAGTTC ATACGAAAAT CGAATTCTGT CGGCGTCGTC 
TGTCTACGGA AACTTGATCA CAACCGTGTG TAAAAAAAGA CGATTAGAAT CCCTCTACTT 
TCACTAACAT AAAACTAAAT CTCCTTAAAG AGCT 

 

Protein sequence

MTLVAAVPRR DASFKKTVSA EDGRRSREET TLHIRKNRMA ERMAKRRTAP MSNQSTAIDS 
NIDSAAHQPV PTTAKEIDIA VAGSVQTFRA WEANPASVND DSLADATKAI RRLLSKERNP 
PVVQVIRSGI ISFLVRFLQE DKTDAPRLQF ESAWALTNIA STSRTSDVAH SGAIPHLVRI 
INHADSAELR EQAAWCIGNV AGDSIENRDG LLATPMLTNG MLKNISRPAN LSLLQNFTWA 
ISNLCRFKPS PDFGAVAPFI SALVNILNEV ENGVGAESAV DLQTDTLWAL SYLSDGDDAR 
INAVLEAGVL KLLMNIFDND SVPSNTLLPA VRVIGNCVSG SHAQTDAVIR AGFTERVGKL 
LHHPSKTVQK DACWAASNIA AGTEVQLNAL LAAEPLNGIP KRIIEMAIYG NFDIRREAVY 
TISNILTTGQ FHETKIMVQE EALKALSSSL ELKQDSRMLI AAMEALETIF EYDAKFNQNY 
CVLFDEEKGI DKLEELQQHS IDEVYEKASA IITLYFGVED EDDLDENMVP NENGDGELAF 
GFPKQLFPEN QQSGAPTFDF SDVDTQGSPA ILGQIQR