Gene PHATRDRAFT_22315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_22315 
Symbol 
ID7203373 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp696123 
End bp697373 
Gene Length1251 bp 
Protein Length326 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182743 
Protein GI219124924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTAAAGTTG GGTGAAGAAT CGGAAAGAGG AAAAGGGACT ACAGGCACAC GATAAGAAAA 
GTAGTCGGCA AGAGACTACA ATACATTGAC TGTGAGCGCT ACGAACATCT CTTACAGTTC
CGTTAGCCAA TCATCACACT ACATTGCATT AGTCCGAAAC ACCCATACAT CATGGACCAA
GTGTACGATA TCCGCGTCGG ACGTCGCAGC GAACGAGAAT ACAGGCACCG TGAGTTACCA
TTATCCTCAC CAGAGTCTTC GAGATCCTCT TACACGATAG AACACGTACA CTCAACCACC
GTAACCCTGC CGCACTCGTC ACTGACAGGC CGATGGAACG CACGCTGGGC ACACGAGATT
CCGCACGACA ACGCGTACTA CAGTAAATGT TTGACTGGAG GAGTTCTTTC TTCTAGCATA
CGATGGGTTC TGACTCCATT GGACAGCATC AAGACGAATA TGCAAGCGAA CCCTAACAAA
TTTCCCTATC TTTCATCCGG GCTCCGGACG GTGTACGCTG AAGAGGGCGT ACGCGGATTG
TATCGCGGCC TAGGCGCAAC TGTTCTTTCC TACAGTTTCC AATCCGGTAC CAAGTACTTT
TTGTACGAAA TTCTCAAAGA TCAGTTCTCC ACACTAGCTG GTGAAGATCA CGCACATGCT
TACCGCGACT TGATTTACGT GACTGCCGCC GGTTGTGCCG AAGCCTGTGC CGACGTGCTC
ATGTGCCCCT GGGAAATGAC CAAAGTGAAA GTGCAAACCA GTGCACCGGG AACCTTCCCT
GTAGCCTTTG GACCTTCCTT GGTCGCCATG ATGCACAATC GCCGCGACCT GCGCTTTCCC
TTCGGTAGTC TAGGCCCGCT GATTGGGAGA CAGTTGCCTG GAACAATTGC AAACTTTTAC
ACATTCGAAA AGGTGGTGGA GAAACTTTAC ACGCACGTCT TGACCCAACC CAAAGACTCA
TACAGCAAGC CCACGCAATT GAGCGTCACT CTGATTGCTG GCTATGTTTC CGGCAGTGTG
GCGGCTGTAA TTTCGCATCC TGCGGATTCC CTTATTAGCC TCATGGCCAA ACCCAAATAC
CAGAATCACA CCATACAAGA AATCATTCGG GACGTAGGAC TGTTGAAACT CGCCACAAAA
GGCCTTGGAC CGCGCATAGC CATGACTGGT ACCATTATAA GTTTCCAGTG GTGGATCTAC
GATACTTTCA AGACGGTCAT GGGTATGGGT ACGACGGGTG GCAAGTCCTA A
 
Protein sequence
MDQVYDIRVG RRSEREYRHR RWNARWAHEI PHDNAYYSKC LTGGVLSSSI RWVLTPLDSI 
KTNMQANPNK FPYLSSGLRT VYAEEGVRGL YRGLGATVLS YSFQSGTKYF LYEILKDQFS
TLAGEDHAHA YRDLIYVTAA GCAEACADVL MCPWEMTKVK VQTSAPGTFP VAFGPSLVAM
MHNRRDLRFP FGSLGPLIGR QLPGTIANFY TFEKVVEKLY THVLTQPKDS YSKPTQLSVT
LIAGYVSGSV AAVISHPADS LISLMAKPKY QNHTIQEIIR DVGLLKLATK GLGPRIAMTG
TIISFQWWIY DTFKTVMGMG TTGGKS