Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_22247 |
Symbol | |
ID | 7203318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | + |
Start bp | 443033 |
End bp | 444209 |
Gene Length | 1177 bp |
Protein Length | 363 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182535 |
Protein GI | 219124490 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCTTGCTGTG TCTTGCTACT GTTGGAATCA ACGCTGTTCT GATCCAATCT GACGTTGCTG TATCTAGGTG TCAAACTGAT TGACAATGGA GGACACTGCC GACGCTCAAA GCACGTCGGT CTCTTCGGTA GACAGTGGGA ATATCGAAAC GGCTTCGACT GCTTCCTCCT CTTCGCCGAC TCCGCCCGAG CGGCAACAAC AGATGCCTCC TCCGCCTCCG CCTTCTAATA CTTCCACGCT CGACCCGGAA AAGACATATC AAGATCTGGA AGCTTGGTTG GCAAAGCTGA CAGTCGGAAC TCCCTTGACT GAGCAAGAAG TTAAAAATCT TACCTCTCTG GCGCGCGAGC GGTTACTGCA AGAGTCTAAC GTGCAGCCCG TGCCAGCACC GGTGACCATT TGTGGCGACA TTCATGGACA GTGGCACGAC CTGATGGAGC TATTTCGTAT TGGTGGGTCT GCACCCGATA CAAATTACCT ATTCATGGGC GATTACGTCG ATCGTGGCTA TTACTCTGTG GAAACGGTGT CCTTGCTTGT CTGTCTCAAA GTGCGATATC CCGATCGGGT CTTTATTCTC CGCGGCAACC ACGAAAGTCG TCAAATTACG CAAGTGTACG GATTTTATGA TGAGTGTGTG AGAAAATATG GATCGGCAAA TGTTTGGAAA CTTTTCACGG ACCTCTTTGA TTACTTTCCT CTCACGGCGG TGGTAGAAAA TGCCATTTTT TGTCTACACG GTGGTTTGTC CCCTTCGATT GATACATTGG ATCATGTGCG CCAGCTAGAC CGCGTGCAAG AAGTACCCCA CGAAGGACCC ATGTGCGATT TGCTCTGGTC GGATCCGGAC GATCGATCTG GTTGGGGCAT CAGTCCTCGG GGAGCCGGTT TTACGTTTGG TGCCGACGTT TCCGCAGCGT TCAACGCTCG CAATGGCCTA CAAACGGTAG CTCGGGCCCA TCAACTCGTC ATGGAGGGAT ACAATTGGAG TCACGAGGGG TCTGTGGTGA CCATTTTCAG TGCACCGAAC TATTGTTACC GCTGCGGTAA TCAAGCCGCG ATTCTGGAAG TCGACGAAAT GCTCTCCAAC AAGCAGTTTC TCCAGTTTGA TCCGGCACCC CGAAGAGGTG AGCCACATTC TGCAAACGCC CGCAAAACAC CTGAGTACTT TTTGTAA
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Protein sequence | MEDTADAQST SVSSVDSGNI ETASTASSSS PTPPERQQQM PPPPPPSNTS TLDPEKTYQD LEAWLAKLTV GTPLTEQEVK NLTSLARERL LQESNVQPVP APVTICGDIH GQWHDLMELF RIGGSAPDTN YLFMGDYVDR GYYSVETVSL LVCLKVRYPD RVFILRGNHE SRQITQVYGF YDECVRKYGS ANVWKLFTDL FDYFPLTAVV ENAIFCLHGG LSPSIDTLDH VRQLDRVQEV PHEGPMCDLL WSDPDDRSGW GISPRGAGFT FGADVSAAFN ARNGLQTVAR AHQLVMEGYN WSHEGSVVTI FSAPNYCYRC GNQAAILEVD EMLSNKQFLQ FDPAPRRGEP HSANARKTPE YFL
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