Gene PHATRDRAFT_22247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_22247 
Symbol 
ID7203318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp443033 
End bp444209 
Gene Length1177 bp 
Protein Length363 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182535 
Protein GI219124490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTTGCTGTG TCTTGCTACT GTTGGAATCA ACGCTGTTCT GATCCAATCT GACGTTGCTG 
TATCTAGGTG TCAAACTGAT TGACAATGGA GGACACTGCC GACGCTCAAA GCACGTCGGT
CTCTTCGGTA GACAGTGGGA ATATCGAAAC GGCTTCGACT GCTTCCTCCT CTTCGCCGAC
TCCGCCCGAG CGGCAACAAC AGATGCCTCC TCCGCCTCCG CCTTCTAATA CTTCCACGCT
CGACCCGGAA AAGACATATC AAGATCTGGA AGCTTGGTTG GCAAAGCTGA CAGTCGGAAC
TCCCTTGACT GAGCAAGAAG TTAAAAATCT TACCTCTCTG GCGCGCGAGC GGTTACTGCA
AGAGTCTAAC GTGCAGCCCG TGCCAGCACC GGTGACCATT TGTGGCGACA TTCATGGACA
GTGGCACGAC CTGATGGAGC TATTTCGTAT TGGTGGGTCT GCACCCGATA CAAATTACCT
ATTCATGGGC GATTACGTCG ATCGTGGCTA TTACTCTGTG GAAACGGTGT CCTTGCTTGT
CTGTCTCAAA GTGCGATATC CCGATCGGGT CTTTATTCTC CGCGGCAACC ACGAAAGTCG
TCAAATTACG CAAGTGTACG GATTTTATGA TGAGTGTGTG AGAAAATATG GATCGGCAAA
TGTTTGGAAA CTTTTCACGG ACCTCTTTGA TTACTTTCCT CTCACGGCGG TGGTAGAAAA
TGCCATTTTT TGTCTACACG GTGGTTTGTC CCCTTCGATT GATACATTGG ATCATGTGCG
CCAGCTAGAC CGCGTGCAAG AAGTACCCCA CGAAGGACCC ATGTGCGATT TGCTCTGGTC
GGATCCGGAC GATCGATCTG GTTGGGGCAT CAGTCCTCGG GGAGCCGGTT TTACGTTTGG
TGCCGACGTT TCCGCAGCGT TCAACGCTCG CAATGGCCTA CAAACGGTAG CTCGGGCCCA
TCAACTCGTC ATGGAGGGAT ACAATTGGAG TCACGAGGGG TCTGTGGTGA CCATTTTCAG
TGCACCGAAC TATTGTTACC GCTGCGGTAA TCAAGCCGCG ATTCTGGAAG TCGACGAAAT
GCTCTCCAAC AAGCAGTTTC TCCAGTTTGA TCCGGCACCC CGAAGAGGTG AGCCACATTC
TGCAAACGCC CGCAAAACAC CTGAGTACTT TTTGTAA
 
Protein sequence
MEDTADAQST SVSSVDSGNI ETASTASSSS PTPPERQQQM PPPPPPSNTS TLDPEKTYQD 
LEAWLAKLTV GTPLTEQEVK NLTSLARERL LQESNVQPVP APVTICGDIH GQWHDLMELF
RIGGSAPDTN YLFMGDYVDR GYYSVETVSL LVCLKVRYPD RVFILRGNHE SRQITQVYGF
YDECVRKYGS ANVWKLFTDL FDYFPLTAVV ENAIFCLHGG LSPSIDTLDH VRQLDRVQEV
PHEGPMCDLL WSDPDDRSGW GISPRGAGFT FGADVSAAFN ARNGLQTVAR AHQLVMEGYN
WSHEGSVVTI FSAPNYCYRC GNQAAILEVD EMLSNKQFLQ FDPAPRRGEP HSANARKTPE
YFL