Gene PHATRDRAFT_22187 details

Gene Information

• Locus tag: PHATRDRAFT_22187
• Symbol: GDCP
• ID: 7203267
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: -
• Start bp: 205248
• End bp: 208721
• Gene Length: 3474 bp
• Protein Length: 1005 aa
• GC content: 52%
• Product: glycine decarboxylase p- protein
• Protein accession: XP_002182636
• Protein GI: 219124701

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCAGTTGGT TTTTTTGCCG TTCCGGAACG ACAAATAAAC GAAGACCCAA AGTCGATCTC 
CCAGGACGTG CCAATCATCT TTTTTTATCT CCGCCACCAT GATTCGACGT TCTATTGCTC 
TTCGTCGAAT TTTGGCACGC GAAAAGTGTA GCCGAGCCTT TCACGCGTCG GCGGTTTTCG 
CGGACGCCTT GGACATGAAA GACACCTTTG CCCGCCGCCA CGGTAAGTAC TGGCTGGGTC 
CTGCGCTTCC AGGAAGTTCA ATTTTTGCAT TAGAGTTTTG TGTTTGCGTC ATCGTGACGT 
CAAGATTTTC TCTACTGTAG TTTTGTGTAA AATCTCTACT GGCACGTGCA ATTTCGATGA 
CGTCCGCTAG TGCGTGGTAT AAACCCTAAT CGAAGCCGGT TTTGATCGAC GATGAAAAAG 
ATCGAGTATG ACCATGGTGG TCCTGTGGCG GTTGATCTTC AGCTGAAGCC CTCTAACGAC 
TGATTTCTTA CCTATCAATT TCTGTTTTTA CAGTGGGACC GTCTCCCGAG GACTCCAAGT 
CCATGTTGGC AACGATTGGC TTTGACTCGT TTGAAGGTCT CATCAAATCG ACCGTCCCGC 
CCAATATTCT GTCGCCCCGA GATCTCGCCT TGGAGCCAGC TCGTACCGAG TCGGAAGCGC 
TCCACCGTAT CAAGGAAATG GCCAAAAAGA ACAAGGTCAT GAAGTCTTAC ATCGGAGCCG 
GCTACTACGA TACACAGGTT CCTCCCGTCA TCCTCCGTAA CATGCTGGAA AACCCCGGCT 
GGTACACGGC TTACACTCCT TACCAGGCGG AAATTTCGCA GGGACGCTTG GAGATGTTGC 
TAAACTTTCA GACACTGGTT GTCGATCTGA CGGGATTGCC CATGGCAGTA GCATCATTAT 
TGGACGAAGC TACGGCGGCT GGTGAAGCTA TGCAGATGAC GTTTGCGCTC AAGGGGAAAA 
AGGGCAAGAA GAACAAGTTC TTTGTCTCGC AGGATGTCCA CCCGCAGACC ATTGGTCTTA 
TCCAAACTCG TGCCGAAGCC ATTGGAATTG AGGTGATTGT TGGCGAGCAC AGCAAATCTG 
ACTTTTCGGC TGGTGACTAC TGCGGCGCTA TGGTGCAGTA CCCGAACACC TACGGAGAGA 
TTGAGAGCGG AGGCGAGTCT TACGAAGCCT TCACTGCTCG CGCCCATGAA GGCAACGCCA 
TGGTTATCGC CGCCACTGAC TTGCTCGCTT TGACCAAGTT GGCCCCGCCC TCTACCTGGG 
GTGCAGATAT TGCCGTTGGA TCGGCCCAGC GTTTTGGTGT CCCCATGGGT TTTGGGGGCC 
CACACGCTGG TTTTCTCTCC ACATCGGACC AGTATAGCCG TAAAATGCCC GGCCGTATTA 
TCGGTGTTAC GGTCGACTCG TACGGAAAAC CCTGTTTGCG AATGGCCATG CAGACTCGGG 
AACAGCACAT TCGTCGAGAC AAGGCGACCT CCAATATTTG TACCGCCCAG GCTTTACTGG 
CCAACATGGC TGCGGCCTAC GCTATTTACC ATGGCCCAAA AGGTCTTGCC GACATCGCCG 
GACGTGTCCA CGCTCTGGCA GCTGTTGGGC ATCGCGAAAT TGGCAAGGCT GGTTTCAAGG 
TTACGGAAGG ACCTTTTTTT GACACGTTTA CCGTCGATGT TTCCTCCAAG GGCATGAACG 
CCACGGAAGT CCAGGCTGGT GCCGCTAGTG TTGGCGCTAA CGTGCGTGTC ATCGACGAAA 
AGCGTGTTGG AGTAGCCATG GGTGAGGGCA TCACTCGTGA CGATCTCGGA AAACTACTGT 
CTGGGGCTTT TAAGATTTCC AGTCCTGATT TGTCAGCAGA CGATTCCCTC TCCAACTTGG 
ATCCTGCCGT CGCCCGTGAA GGTGAAATCT TGACACACCC TATTTTCCGT CAGCACCACT 
CCGAAACGCA AATGCTCCGG TACCTCAAGA CACTCGAAAA CCGTGATTTG GCTCTGAACC 
ACTCGATGAT TTCGCTTGGC TCCTGTACCA TGAAGCTCAA CGCAACGAGC GAAATGATTC 
CCGTGACTTG GCCTGAATTT TCTGACATAC ACCCGTTTGC GCCGCACGAT CAAACTATTG 
GCTATCACGA AATGATTGAA GATTTAAACA AGGATTTGTC GGAAATCACA GGTTTCGCTG 
CGGTGAGTGC CCAGCCTAAC TCGGGTGCGA CTGGCGAATA CGCGGGTCTA CTGGCCATTA 
CAAAGTACCT AGAAAGCACC GGTGAAGGAC ACCGGAACGT TTGCTTAATT CCCAAATCAG 
CCCATGGGAC CAACCCGGCT AGTGCAGTCA TGGCTGGTAT GAAGGTTGTT GTCGTAGAGA 
ATGACGACCA GGGCAACGTG GATTTTGGTG ACTTGACCGC CAAGATTTCC AAGCACAAAG 
ACAACTTGGC CGCCTTCATG GTCACATATC CTTCCACGTT CGGTGTCTTT GAAGAAAGAA 
TCGTAGAAAT TTGCGACGCA ATCCACGATG CCGGTGGCCA AGTATACATG GACGGTGCTA 
ACATGAACGC ACAGGTTGGT CTGACGAGTC CGGGTTTGAT TGGCGCTGAC GTGTGCCATT 
TGAACTTGCA CAAGACCTTC TGCATTCCTC ACGGAGGTGG TGGCCCAGGT AGGTTTGAAT 
TGCATGCAGT TTGATTGCTC AAGGTTTTCG GGTATGACTG ACACTTTTGT TCTAGGTGTC 
GGTTCTATCG GAGTTCGTGA GCACCTTGCT CCTTTTTTGC CAGGGCACGT AATGGATCCT 
CAGGCGTCGG GAAAGCTTTG CGGAAACGAC ATTTGTGTAC CAAAGACTGA GGGTGCTGTA 
GCTGCAGCCC CTTTCGGTTC TGCCGCCATT CTCCCGATTT CTTGGATGTA CATTAAGATG 
CTTGGAGCTG AAGGTCTTAA AGCTGCCACC AGCCATGCTA TCTTGAACGC GAACTACATG 
GCTGCGCGTA TGAATGGAGC ATATGATGTC CTCTTTACTG GAAAAAACGG ACAGTGTGCG 
CACGAATTTA TTTTGGATCT TCGTCCCTTG AAAGCCGCAA CCGGTGTAAC GGAAGAGGAC 
GTTGCTAAGC GTCTTCAAGA TTACGGATTC CACTCTCCTA CCATGTCTTG GCCCGTTGCC 
GGAACTCTCA TGATTGAGCC GACTGAGTCG GAAGATTTGG GGGAACTTGA TCGCTTTTGC 
GACGCCATGC TTTCCATTCG GGCAGAAATT GATGATATTG GCAGTGGCCG TATTGCTTTG 
GAGGATTCGC CATTGCACTA CGCCCCGCAC ACAATGAATG ACCTGGTCAA TGAGAAGTGG 
GATCGTCCGT ACTCGAAGGA GGTTGGCATT TACCCCGCTC CTTGGATCCG CGCCAACAAG 
TTCTGGCCCA GCTGTGGCCG TGTCGATAAT GTCTACGGGG ACCGAAACCT GGTATGCACA 
TGTCCCCCAC TGGATGTATA TGAAGACGAT GATGACAAGA AGCTTGCCGC TTAA 

 

Protein sequence

MIRRSIALRR ILAREKCSRA FHASAVFADA LDMKDTFARR HVGPSPEDSK SMLATIGFDS 
FEGLIKSTVP PNILSPRDLA LEPARTESEA LHRIKEMAKK NKVMKSYIGA GYYDTQVPPV 
ILRNMLENPG WYTAYTPYQA EISQGRLEML LNFQTLVVDL TGLPMAVASL LDEATAAGEA 
MQMTFALKGK KGKKNKFFVS QDVHPQTIGL IQTRAEAIGI EVIVGEHSKS DFSAGDYCGA 
MVQYPNTYGE IESGGESYEA FTARAHEGNA MVIAATDLLA LTKLAPPSTW GADIAVGSAQ 
RFGVPMGFGG PHAGFLSTSD QYSRKMPGRI IGVTVDSYGK PCLRMAMQTR EQHIRRDKAT 
SNICTAQALL ANMAAAYAIY HGPKGLADIA GRVHALAAVG HREIGKAGFK VTEGPFFDTF 
TVDVSSKGMN ATEVQAGAAS VGANVRVIDE KRVGVAMGEG ITRDDLGKLL SGAFKISSPD 
LSADDSLSNL DPAVAREGEI LTHPIFRQHH SETQMLRYLK TLENRDLALN HSMISLGSCT 
MKLNATSEMI PVTWPEFSDI HPFAPHDQTI GYHEMIEDLN KDLSEITGFA AVSAQPNSGA 
TGEYAGLLAI TKYLESTGEG HRNVCLIPKS AHGTNPASAV MAGMKVVVVE NDDQGNVDFG 
DLTAKISKHK DNLAAFMVTY PSTFGVFEER IVEICDAIHD AGGQVYMDGA NMNAQVGLTS 
PGLIGADVCH LNLHKTFCIP HGGGGPGVGS IGVREHLAPF LPGHVMDPQA SGKLCGNDIC 
VPKTEGAVAA APFGSAAILP ISWMYIKMLG AEGLKAATSH AILNANYMAA RMNGAYDVLF 
TGKNGQCAHE FILDLRPLKA ATGVTEEDVA KRLQDYGFHS PTMSWPVAGT LMIEPTESED 
LGELDRFCDA MLSIRAEIDD IGSGRIALED SPLHYAPHTM NDLVNEKWDR PYSKEVGIYP 
APWIRANKFW PSCGRVDNVY GDRNLVCTCP PLDVYEDDDD KKLAA