Gene PHATRDRAFT_52311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_52311 
SymbolDRR3 
ID7203123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp461112 
End bp462354 
Gene Length1243 bp 
Protein Length414 aa 
Translation table 
GC content47% 
IMG OID 
Productdiatom response regulator 3 
Protein accessionXP_002182230 
Protein GI219123851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCTT GCTCATATGA TCATATGATG AGTGAAGATT CCGTACCCAA CATAGAGGAC 
GACAATGTCT GGAAGAGTTT GAAAACGAGC CTGACAAGTT TTCTCAGAGG AACAACATTA
GGGTGGCAAG CGGCCGCCCG GCAGCTCCGC GCCGAAGGAG GCGACATTGG AGTAACGGAC
TCTCGAGGGG ACGGCTCCAT CATTGACTCC TCTGCTTGTC ACAAACGGAA AATCTGGTTT
CGATTGCCAT TGCTCATTCT GGAAGCAGAA TTGTGGGATC GCAAGAAGTC GGTGTGTGAA
ATTTCAAATA CAAATGAAAC TGACGATGAA TATGAATCAA CGCCACTTAA GCGTGCGCTG
GTGATTGACG ATTCGAAGGT GGTCCGTAAG ATTTTGGCAA ATGCCTTATC TCGACTTGGC
TTTGAGACAA TGTTGGCTGT AAACGGTTTG GAGGGCCTGC GAGCGTTGCA GGAGTCTACG
TACGATCTTG TCTTATGTGA TCTACTGATG CCGGTCATGG ACGGCCTGGA CTGTGTTCGA
TCATATCGTC ATTGGGAATC CAACAACAGA TCCACACAAC AGCACATAGT CGCAATGTCG
GCGCACGCAA GTGAAGTCGA TATCGAACGA TGTTTAAAGT TGGGCATGGA CTGCTATTAT
TCCAAGCCTA TTACCATGGA AACACTCAAA ATTCTTGCGC ATGATATAGA GGAGTATTCG
AATTGCACAC CTTTAAAAAC GACTAGGGCG GAATTGGCAA CAACCAGCTC ACCGACATCG
ACCTTTGCTG TCAAACGTCG ACGAACGTAT TCGGACGCTG CGGATCGAAA AAGCTGTCTC
GTTGCCTGCT GCAACGAAAT CGATGCTTCA ACTGTTTGTC ATGTACTGCA AGAACACGAC
TGGACAATCA AGATAGCGAA ACACAGCAAA GTAGTTCTCG AGTTGCTGAA GGAAAGAAAC
TGGGGCTTGG TGTTTGTAGA CAGCGATAGA ATTGGGCACG ACAACATTAG TTGTATGCAC
GAGTTTCGAG TTTGGGAAAA GCATCATCGT GTACGCCGCC AACGTAATAT TTACCTCCTC
ATGGTTGATT TGCCACAGCC TAGGACGTCA TCGTTGTTGC AGCTCCCTGC TGGAGTGGAC
GGAGCTGTTC ACAAACCAGC ACGACCTGAT GATATTGGAC GCGTACTTCA AACAGTCGTC
AAAGCGTCTG GATTCGATGC ACGAGATATT ATTGTGAGCA CTT
 
Protein sequence
MFSCSYDHMM SEDSVPNIED DNVWKSLKTS LTSFLRGTTL GWQAAARQLR AEGGDIGVTD 
SRGDGSIIDS SACHKRKIWF RLPLLILEAE LWDRKKSVCE ISNTNETDDE YESTPLKRAL
VIDDSKVVRK ILANALSRLG FETMLAVNGL EGLRALQEST YDLVLCDLLM PVMDGLDCVR
SYRHWESNNR STQQHIVAMS AHASEVDIER CLKLGMDCYY SKPITMETLK ILAHDIEEYS
NCTPLKTTRA ELATTSSPTS TFAVKRRRTY SDAADRKSCL VACCNEIDAS TVCHVLQEHD
WTIKIAKHSK VVLELLKERN WGLVFVDSDR IGHDNISCMH EFRVWEKHHR VRRQRNIYLL
MVDLPQPRTS SLLQLPAGVD GAVHKPARPD DIGRVLQTVV KASGFDARDI IVST