Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_52311 |
Symbol | DRR3 |
ID | 7203123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | + |
Start bp | 461112 |
End bp | 462354 |
Gene Length | 1243 bp |
Protein Length | 414 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | diatom response regulator 3 |
Protein accession | XP_002182230 |
Protein GI | 219123851 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTCTT GCTCATATGA TCATATGATG AGTGAAGATT CCGTACCCAA CATAGAGGAC GACAATGTCT GGAAGAGTTT GAAAACGAGC CTGACAAGTT TTCTCAGAGG AACAACATTA GGGTGGCAAG CGGCCGCCCG GCAGCTCCGC GCCGAAGGAG GCGACATTGG AGTAACGGAC TCTCGAGGGG ACGGCTCCAT CATTGACTCC TCTGCTTGTC ACAAACGGAA AATCTGGTTT CGATTGCCAT TGCTCATTCT GGAAGCAGAA TTGTGGGATC GCAAGAAGTC GGTGTGTGAA ATTTCAAATA CAAATGAAAC TGACGATGAA TATGAATCAA CGCCACTTAA GCGTGCGCTG GTGATTGACG ATTCGAAGGT GGTCCGTAAG ATTTTGGCAA ATGCCTTATC TCGACTTGGC TTTGAGACAA TGTTGGCTGT AAACGGTTTG GAGGGCCTGC GAGCGTTGCA GGAGTCTACG TACGATCTTG TCTTATGTGA TCTACTGATG CCGGTCATGG ACGGCCTGGA CTGTGTTCGA TCATATCGTC ATTGGGAATC CAACAACAGA TCCACACAAC AGCACATAGT CGCAATGTCG GCGCACGCAA GTGAAGTCGA TATCGAACGA TGTTTAAAGT TGGGCATGGA CTGCTATTAT TCCAAGCCTA TTACCATGGA AACACTCAAA ATTCTTGCGC ATGATATAGA GGAGTATTCG AATTGCACAC CTTTAAAAAC GACTAGGGCG GAATTGGCAA CAACCAGCTC ACCGACATCG ACCTTTGCTG TCAAACGTCG ACGAACGTAT TCGGACGCTG CGGATCGAAA AAGCTGTCTC GTTGCCTGCT GCAACGAAAT CGATGCTTCA ACTGTTTGTC ATGTACTGCA AGAACACGAC TGGACAATCA AGATAGCGAA ACACAGCAAA GTAGTTCTCG AGTTGCTGAA GGAAAGAAAC TGGGGCTTGG TGTTTGTAGA CAGCGATAGA ATTGGGCACG ACAACATTAG TTGTATGCAC GAGTTTCGAG TTTGGGAAAA GCATCATCGT GTACGCCGCC AACGTAATAT TTACCTCCTC ATGGTTGATT TGCCACAGCC TAGGACGTCA TCGTTGTTGC AGCTCCCTGC TGGAGTGGAC GGAGCTGTTC ACAAACCAGC ACGACCTGAT GATATTGGAC GCGTACTTCA AACAGTCGTC AAAGCGTCTG GATTCGATGC ACGAGATATT ATTGTGAGCA CTT
|
Protein sequence | MFSCSYDHMM SEDSVPNIED DNVWKSLKTS LTSFLRGTTL GWQAAARQLR AEGGDIGVTD SRGDGSIIDS SACHKRKIWF RLPLLILEAE LWDRKKSVCE ISNTNETDDE YESTPLKRAL VIDDSKVVRK ILANALSRLG FETMLAVNGL EGLRALQEST YDLVLCDLLM PVMDGLDCVR SYRHWESNNR STQQHIVAMS AHASEVDIER CLKLGMDCYY SKPITMETLK ILAHDIEEYS NCTPLKTTRA ELATTSSPTS TFAVKRRRTY SDAADRKSCL VACCNEIDAS TVCHVLQEHD WTIKIAKHSK VVLELLKERN WGLVFVDSDR IGHDNISCMH EFRVWEKHHR VRRQRNIYLL MVDLPQPRTS SLLQLPAGVD GAVHKPARPD DIGRVLQTVV KASGFDARDI IVST
|
| |