Gene PHATRDRAFT_47779 details

Gene Information

• Locus tag: PHATRDRAFT_47779
• ID: 7202941
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 7827
• End bp: 9963
• Gene Length: 2137 bp
• Protein Length: 622 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002182142
• Protein GI: 219123667

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGCTTTTTC GAAAAGTCAC GACCGCGATA AACACCACCA CCACCATGAA GACTTCCTTT 
GTCTTTCTTA CTCTCTTTTC CCCTTTGCTC GTGCTTGCGG CTGTAGAGGC GCAGTCTGCT 
GACGTCTCGG AACAGCCTGA CAAGTTGGTG AGTATATCTG TACTGTAGGC ACTCAATCCA 
AGCCTATATT TGTCCCCTTT TCCGAAGCTT GGCAACAATT TCCTCTTGGT AAAACTCTCA 
TCCTATCTCT CTCTCTTGTG CCTCTTCCAT TTCAATAGAA CAATGGTGTC CCATCCATCC 
TTGAGGTCAC TGGTCGCCGC CTCAAGAAGG GAGGCTCCAG CTCGTATGGC AAAGGCGGCA 
CAGCTTCGTC CAGCGCGGAC AGCAAAGGCA AGGGCGGCAA AGGTGCGTCC GGCTATACGA 
AAAGCACCAA GTCCTCCAAG TCTCGCAAAT CGGCAAAGGA TCCCAAATCA GAAAAGCACC 
CCAAGGCTAC CAACGCACCT GTACCCGTCG CAGCTCCCGT AGTCGCCCCT GTTCCACCTC 
CCACCGTCGC TCCCGTCCCA TCTCCCATTG TTCCTTTTAT GGAGGTTGTG GATGTGGGAT 
ACAGCATCTC GGTGGAAGCC AACATGGGGA CTGATATGAT GGAGTTCTTT ACAGAGCTTG 
AAACAGGACT TGTTGCCGCC ATGGATATCT TGGCGCCCGA AATTGTCGCG GAGATTCTTG 
CCCCCGGAGG ACGATACTTG AAGGCTAGTG TCCTGGCCAT TCACAATCAG CGCCGTCTGA 
CTGCCGTGGT GCAGTTGCCG ACCTCCATTG AATCCTTAAT GATGATGGGT AAGTGGAGGT 
TTGGATGAAG CATGAGATGT GCCGTTGCTA GACGTGCTAT GGTTCTAATG GTTGTTCTGG 
CTTTTCATTT TGTTTGTCAG AGTGCGGCAA TTCTGTGATT GGCGATGATT TACTTTGCTT 
TGACATTGTT CATAGCATTG CGCTAGAAAT CAGCGGTGAC ACTGTCCCAG AGGAATTTAC 
GGGGCTCTTT GAAGAAGACA TGGACACTGC AATTAAAGAA GATCTGCTAC GAGACAAATT 
GCTTGAGACC AATCCTAACT CTACAGTGAT TGTCTTTCCC CCTCCTGTCC AGCCAACTCC 
CGAAGTGTCC AGCCCCCCGA CTTTGGCTCC GACTACGAAG CCCGCCGGCG CTCCGCCAGG 
AATGCCAGTC AATGACCCCA ATTTGGTGCC GGCTCCATCT CCAACTGCAG CCCCAACTTT 
GATGCCGTCT ACGATGCCCT TGGCAGCACC CCCCACTGGA ACCGACTGGA CAATCAGACC 
CATTACGGCC GACGATTATT GGCAAAGCGT CACGTACGCG AATAACATGT TTGTCGCAGT 
CTCATTCGAC CGGGTCATGA CCAGTCCCGA CGGCATAAAT TGGACGCCTC GTACCGCTGC 
GGAAACCGGC GAATGGCGGG ACGTCACTTT TGGAAAAGGA ATGTTTGTTG CAGTGGGATG 
GAGTATCGTC ATGTACAGTT CGAATGGCGT GGATTGGACC AGTGCAACCA AGGTGCCCGC 
CCAAGAATGG CTTTCCGTCA CCTACGGAAA CGGATTGTTT GTCGCCGTGC CCTATGGTGG 
CAATCGTATC ATGACCAGTT CGGACGGCAT GGCTTGGACG AGTCGTACCA GTGCGGCCGA 
CGCTTTCTGG CAGGGTGTCG CGTACGGGAA TAATATGTTT GTGGCAGTTT CTCAGAATGA 
TGGAACGGTC ATGACCAGTC CAAACGGCAT CAACTGGACG GCTGGTACCG CTGCGGCAGC 
GAATAATTGG ATCAGCGTCA CGTACGGCAA AGGGAAGTTT GTCGCAGTGT CTTGTTTTGG 
CAGCGGCAAA AGTGTCATGA CAAGTGCAGA TGGCATAACT TGGACTGGCC ACACCGGTGT 
GCCAAACACT TGTTGGTGGC GTGTGACGTT TGGTGGCAAC ACGTTCGTTG CCGTGGCGTC 
TCGTGGCGAC GGCAGTCGGA TCATGACTAG TTCGGATGGC GAAACCTGGT CCTCGCAGAT 
CACTCCCGAA GCGAACACCT GGAGGGGCGT GACTTTTGGC GCAAATACAT TTGTGGCGGT 
AGCGGATAGT GGAACCAATC GAGTCATGAC CGGGTAG 

 

Protein sequence

MKTSFVFLTL FSPLLVLAAV EAQSADVSEQ PDKLNNGVPS ILEVTGRRLK KGGSSSYGKG 
GTASSSADSK GKGGKGASGY TKSTKSSKSR KSAKDPKSEK HPKATNAPVP VAAPVVAPVP 
PPTVAPVPSP IVPFMEVVDV GYSISVEANM GTDMMEFFTE LETGLVAAMD ILAPEIVAEI 
LAPGGRYLKA SVLAIHNQRR LTAVVQLPTS IESLMMMECG NSVIGDDLLC FDIVHSIALE 
ISGDTVPEEF TGLFEEDMDT AIKEDLLRDK LLETNPNSTV IVFPPPVQPT PEVSSPPTLA 
PTTKPAGAPP GMPVNDPNLV PAPSPTAAPT LMPSTMPLAA PPTGTDWTIR PITADDYWQS 
VTYANNMFVA VSFDRVMTSP DGINWTPRTA AETGEWRDVT FGKGMFVAVG WSIVMYSSNG 
VDWTSATKVP AQEWLSVTYG NGLFVAVPYG GNRIMTSSDG MAWTSRTSAA DAFWQGVAYG 
NNMFVAVSQN DGTVMTSPNG INWTAGTAAA ANNWISVTYG KGKFVAVSCF GSGKSVMTSA 
DGITWTGHTG VPNTCWWRVT FGGNTFVAVA SRGDGSRIMT SSDGETWSSQ ITPEANTWRG 
VTFGANTFVA VADSGTNRVM TG