Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38235 |
Symbol | |
ID | 7203168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | - |
Start bp | 395481 |
End bp | 396182 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182385 |
Protein GI | 219124174 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.321551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACT GGACGTCGGT TGCGAGCGTC GTGTCTTCTA TGCAGGCCCA AGGTCTCGTG GGACGCGATC TGGCCGTGGC CTTGCACGAT TTTGTGCGCG ATATTCCCTT TGGTTTCACT CGTCAATTTG ACCTGGCAAC GGCGGACTAT ACACTGCAAC GTCAGCGTGG ACACTGTACA CCCAAATCGG AACTGTTCGT GTCTCTTCTT CGTCGCGCCG GCTTTGCCGA TGCCACAGTG GTGACGGTAT CCATTCCGGG AGATGTTCTA CACTATTTGG GATCCGGAGA GTCTTCGCCC TTCCCCTCTA CACTTCAACA TTGCTTTACC CAGGTGACGG TGGAGAAGGG AGGGAAACTC TGTCGTCTAG ATTCATACGT CATTGATCCG CCTCTTTTTC AAGCCGCACG GGAACGCTTG AAGGTAACTG GTAGGCACGC GGGCTATGGT ATCCACAAAG AAGCCACAAA CGAATGGGAT GGTAGTCAAG ATGCCTTTTG TCAATACGTG CCGTCCACCC AAACATCACA TCTCGAGTTT TGCATGAACT CGACAAATGA AGTTGTGTCG CGACCCAATT ACTTACACAG TGGCTTCACA AGACTACTGC GCATTCCCAT CATAGGGTGG CCTGCGGGGG CTTGGCTGGA AACCCAGTCT AAAGTGTTTG ATCGCCTGCG GAACAGGATT TCAATAGAGT AA
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Protein sequence | MKNWTSVASV VSSMQAQGLV GRDLAVALHD FVRDIPFGFT RQFDLATADY TLQRQRGHCT PKSELFVSLL RRAGFADATV VTVSIPGDVL HYLGSGESSP FPSTLQHCFT QVTVEKGGKL CRLDSYVIDP PLFQAARERL KVTGRHAGYG IHKEATNEWD GSQDAFCQYV PSTQTSHLEF CMNSTNEVVS RPNYLHSGFT RLLRIPIIGW PAGAWLETQS KVFDRLRNRI SIE
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