Gene PHATRDRAFT_38235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38235 
Symbol 
ID7203168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp395481 
End bp396182 
Gene Length702 bp 
Protein Length233 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182385 
Protein GI219124174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.321551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT GGACGTCGGT TGCGAGCGTC GTGTCTTCTA TGCAGGCCCA AGGTCTCGTG 
GGACGCGATC TGGCCGTGGC CTTGCACGAT TTTGTGCGCG ATATTCCCTT TGGTTTCACT
CGTCAATTTG ACCTGGCAAC GGCGGACTAT ACACTGCAAC GTCAGCGTGG ACACTGTACA
CCCAAATCGG AACTGTTCGT GTCTCTTCTT CGTCGCGCCG GCTTTGCCGA TGCCACAGTG
GTGACGGTAT CCATTCCGGG AGATGTTCTA CACTATTTGG GATCCGGAGA GTCTTCGCCC
TTCCCCTCTA CACTTCAACA TTGCTTTACC CAGGTGACGG TGGAGAAGGG AGGGAAACTC
TGTCGTCTAG ATTCATACGT CATTGATCCG CCTCTTTTTC AAGCCGCACG GGAACGCTTG
AAGGTAACTG GTAGGCACGC GGGCTATGGT ATCCACAAAG AAGCCACAAA CGAATGGGAT
GGTAGTCAAG ATGCCTTTTG TCAATACGTG CCGTCCACCC AAACATCACA TCTCGAGTTT
TGCATGAACT CGACAAATGA AGTTGTGTCG CGACCCAATT ACTTACACAG TGGCTTCACA
AGACTACTGC GCATTCCCAT CATAGGGTGG CCTGCGGGGG CTTGGCTGGA AACCCAGTCT
AAAGTGTTTG ATCGCCTGCG GAACAGGATT TCAATAGAGT AA
 
Protein sequence
MKNWTSVASV VSSMQAQGLV GRDLAVALHD FVRDIPFGFT RQFDLATADY TLQRQRGHCT 
PKSELFVSLL RRAGFADATV VTVSIPGDVL HYLGSGESSP FPSTLQHCFT QVTVEKGGKL
CRLDSYVIDP PLFQAARERL KVTGRHAGYG IHKEATNEWD GSQDAFCQYV PSTQTSHLEF
CMNSTNEVVS RPNYLHSGFT RLLRIPIIGW PAGAWLETQS KVFDRLRNRI SIE