Gene PHATRDRAFT_38209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38209 
Symbol 
ID7203098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp335928 
End bp336539 
Gene Length612 bp 
Protein Length203 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182374 
Protein GI219124151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0029271 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAT CAATAGAGGG GGGAATGGTT TTAGACGCTC TGCCGTACAT CGACAGCGCG 
AATGAAGACT ACGAACAGTA TGCTCTCGCA TTAATCGACG ATGAAATGAA TAATATCAGT
CCTATGATCA CTCCAAAGTC AATCCCCACA AAATTTCGGA CACCCTTGAT GAAATACGAA
TTTTCGCAAA CCCCCGGAAT CTGGGAGCTT GACAGGCCTG ATAGCGAAAC CAGAGTGAAA
ACGCCTGAAA CGGAGAATAT CGATGATTGG AAAAGAGCCG TTGAAGAAGC GAAAATTGTC
TACGAGTGGG AACGATTGAG ATCTGTGTAT CTAGAAATTG ATAAAGTTGG GGAGGGAAAT
GCGGCAAGTA TATGGATGCA ATATAATAAT ACTTTAGACC ATTTGAAAAC GTTGTGGGAG
CAAGCGCTTC ACGCTCAGCG CGATCGAGTG GAAGAAGTCA ACCATGGACG CCAGCAAGAG
CAACTAACGG CCGGCGAAGA TTTGACCCTA TTGGCTACCG ACTATAACAC GCGAATACAA
AAGTTGATTA CGTTGAAAGA AGCGGTGGCA AATTTAAATC AGCAGACTCG AGAAGGGAGT
AAGATACCTT GA
 
Protein sequence
MEESIEGGMV LDALPYIDSA NEDYEQYALA LIDDEMNNIS PMITPKSIPT KFRTPLMKYE 
FSQTPGIWEL DRPDSETRVK TPETENIDDW KRAVEEAKIV YEWERLRSVY LEIDKVGEGN
AASIWMQYNN TLDHLKTLWE QALHAQRDRV EEVNHGRQQE QLTAGEDLTL LATDYNTRIQ
KLITLKEAVA NLNQQTREGS KIP