| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38113 |
|---|
| Symbol | |
|---|
| ID | 7202957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011683 |
|---|
| Strand | + |
|---|
| Start bp | 105171 |
|---|
| End bp | 106517 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182158 |
|---|
| Protein GI | 219123701 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAC GTGGTAGTCC TTCCCCACGA GTCGCCGAGG CCATTGGGCG CAGCCCTCAT
CACGAAGAGC GCCAAGAAGA AAAGGATCGT CCTCGTTTCC GCTTTGGGCT AGCGGTACAT
TCGCGACGAA AACTGACCCA GCTCGGGTCG CTTGCCGCGT ACGTCGTTTT GGTAGCGCTA
GGTTCGCTTT GTCTGACGTC TCGTCTCCAC CTTCACACCT CGATGCCGGT GTCGAGAACA
TCTCCCACGT TGGATCTTAC CATGGACGAT ACGAGTGCCA CCAGTACTCT TCCCGAGGAG
TCACCCGTGT CTCTGTGGCG TACACTGCTC CGAACAAATA CCAAAGCCGT TGCTGCAAAG
GAAAAGGCAT CCGTATCCGT TCAACTCGCC CAGATGTCCA GCGAACCCTT GCCTCCAGGT
GTCGTGGATT TGCCCCAAAC CATCAAAAGT ACCGAGATTC CTCCCACCAA CAAGACATTG
GTGGTAGTCC TGGGCGACTT GCGCTGCGGA GAAAACGCGT GGCAATCTCT CTACCGAAAC
GTGCTCGACG AAAACATGGC CGATCTCGCG GTCTTTTCCC AAGTACCCGT ACAAGAAACC
TACCGACACG CCAACGTCAG TATTTGGGAA CGAGCCCGCC ACGTCGAGAT TGTGCCGCGG
TACCACGATT GGGCTGATGC GATCGACCAT TTGGCCGGAG AAAAGCTCTG GCGGGACGAG
GTCCTGCAGC GCTACACTCC GCACACGCAT CCACTCATGC TCGGGGGAAT CCGCGGCTTT
CAGTCGAGCG CGGCTATTGT CTTTTGGTTC CGCTGGTACT TGGCGCAACG CATCCGCACG
TTGCAGTGGG CAACGCAGTA TGATCGCTTC ATCATTACCC GGACCGATCA GTACTACTCG
TGTCCGTTAC GTATGAATAC GCTCCAGCCG GAGCGTATTT GGGTGCCTAC GGGGCAGAAC
TATCGCGGAA TAACCGATCG ATTCTATATT GCCCCGGCCG ATGTAATACT GGAAACTTTG
GAAGTGTTTC CACTCTTTTT GCGACAACCA GACATCTTTG CCAACTTTAC GAGCAGGCTT
ATGAATCCGG AAACCTTCCT GCGAACCATG TGGACGAAAG CCGGACTGTT GTCCCGGGTG
TACCGATTTC GTCGAATCAT GTTTACCTGC ATGACTCCGA TTGACACCAC AAAATGGGGA
GTCATGCGAG AGAAGGTTCA GGAAGGAGTC CATCTCAAGT ACCCTGGGGA GTACACTGAC
TTGGCTGATA TTTGTGAACG AGTTAACCAT CCGGAACGGT ACCCGTTTCC TTACCGGAAA
GGTTTAGAGC GAGAAGATCT TCAATAG
|
|---|
| Protein sequence | MSQRGSPSPR VAEAIGRSPH HEERQEEKDR PRFRFGLAVH SRRKLTQLGS LAAYVVLVAL
GSLCLTSRLH LHTSMPVSRT SPTLDLTMDD TSATSTLPEE SPVSLWRTLL RTNTKAVAAK
EKASVSVQLA QMSSEPLPPG VVDLPQTIKS TEIPPTNKTL VVVLGDLRCG ENAWQSLYRN
VLDENMADLA VFSQVPVQET YRHANVSIWE RARHVEIVPR YHDWADAIDH LAGEKLWRDE
VLQRYTPHTH PLMLGGIRGF QSSAAIVFWF RWYLAQRIRT LQWATQYDRF IITRTDQYYS
CPLRMNTLQP ERIWVPTGQN YRGITDRFYI APADVILETL EVFPLFLRQP DIFANFTSRL
MNPETFLRTM WTKAGLLSRV YRFRRIMFTC MTPIDTTKWG VMREKVQEGV HLKYPGEYTD
LADICERVNH PERYPFPYRK GLEREDLQ
|
|---|
| |