| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38085 |
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| Symbol | |
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| ID | 7203036 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | + |
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| Start bp | 28878 |
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| End bp | 31246 |
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| Gene Length | 2369 bp |
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| Protein Length | 619 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182146 |
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| Protein GI | 219123676 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGGT GCCATTCCTC CATGGTTAAC GCCTTTCGTA GCGTTTCTCG CTCACTGTCA
ATTCCAAGCA GACTCGCCGT CTTGAAGGAT CCCCAAGATC TCGTCACCAA AGAAGCCAAC
GTGAAGCCCG CCGGGACTCG CACCAAACCA ACCGTTGATC CCTTCAATCC CAATTTCGAA
TCGATCGCTT CGGTTCCCTA CAACACAGCG TTTCCGTCGT CCACGAAGGA GTATAAGACC
GTTGTCCACG AAGCAACCGG CCACCGGCTT CACGTGCCCT TCCGTCGCGT CCATTTGGAA
GATCCCGACC AACTCTACCT GGATTTGTAC GATACCTCGG GGCCGCAGGG CGTTGATCCC
AAGAAGGGGT TGGCCAAGTT GCGCCAGGAA TGGACGGACG AGCGTGAGGG TAAGTACGAA
CGTTACACTC AGATGCATTT CGCCAAACAG GGAATCGTTA CCGAAGAAAT GCTCTATTGC
GCTACGCGAG AAAACATGGA ACCTGAGTTT GTCCGTTCCG AGGTGGCCCG AGGACGCGCC
ATTATTTGCT CCAACAAAAA GCATCCCGAA CTCGAGCCGC AAATCATTGG ACGCATGTTT
AAAGTCAAAA TCAATTCGAA TATTGGAAAC AGCGAACTGG GAAGCAATGT AAGTGTACCT
GTTCTGCCAC CAACTATCCG CAACTGTCGT AGAGAGCAGT ATTTAGTGGA ATCCACATAA
ATGCTCACCA TTTCTTGTTA CCACTTACGC TTTCAGATTG AAGACGAGGT GGAAAAGTTG
CAATGGAGCA TGCTGTGGGG TGCCGACACA CTTATGGATT TAAGCACAGG CAAACATATT
CACCAAACCC GCGAATGGAT CATTCGCAAT TCGCCCATCC CTGTTGGTAC CGTGCCCATT
TATCAGGCTC TCGAAAAAGT GGACGGGATT GCCGAAGACT TGACGTGGGA ATGTTTCAAG
GAGACGCTTC TCGAACAAGC CGAGCAGGGT GTGGACTACT TCACCATTCA CGCGGGCGTC
TTGCTTCGAT ACGTGGTACG TCATATCGCG GGTTGGCTTG CACCGCAATG TACTACGCCT
TGAAGTAGAG ATTTTTTGTA AACTCACTTT TCAATTTGAT TAGCCAATGA CGGTCAAGCG
CATGACAGGT ATTGTCAGTC GCGGCGGATC AATCCATGCC AAATGGAATA TTTTTCATCA
CAAGGAAAAT TTTGCCTACG AACATTGGGA CGACATTTTG GAAATTTGCG CCAAGTATGA
TATCGCGCTG AGTATTGGTG ATGGACTACG TCCCGGATCC ATCTACGATG CCAACGACGA
AGCGCAGTTT GCGGAACTCT TTACTCAGGG AGAACTAACT AAGCGCGCTT GGGAAAAGGA
CGTACAAGTT ATGAATGAAG GTCCTGGACA CGTTCCTCTG CACAAGGTAA GCTATGATCA
GGCAAGGTAG ATTTCGCCTC GACCGTACGT CTTGCTACTA ATCCTTCGAC TTGGTTGCGT
ACCCAGATAC CCGAAAACAT GCGCAAACAG CTAGAGTGGT GCAACGAAGC ACCTTTCTAT
ACACTAGGCC CTCTCACTAC AGATATCGCA CCCGCCTACG ATCACATTAC TTCCGCCATT
GGTGCCGCAA CGATTGCGTC TCTCGGAACT GCCATGCTCT GTTATGTTAC GCCAAAGGAG
CATCTTGGTC TTCCCAACCG CGACGATGTC AAGGCTGGTA TCATTGCCTA CAAGATTGCA
GCGTACGTAT CTGGTGGTTT TTGGTTGTAT GTCCGCCAAG TTTACAGTGT TGATTGATCC
CCCACGGCAC AGACTACACA GCAAGGTACA ATAGGAGTAT TGCATTGACA GTCAATACAC
TCACGTTAAA CACTTTGTCG TTTCTGTTTA CAGTCACGCC GCCGATCTTG CCAAGGGATA
TCCTGGGGCC CAGGATCGCG ACAATGCTCT CTCGAAGGCC CGTTTCTCTT TCCGTTGGAA
TGATCAGTTC AACATTAGCC TCGATCCTGT CACTGCCAGA GAATTCCACG ACGAAACCCT
TGACAGCGAT GCCGCAAAGA GTTCCCATTT TTGCAGGTAA GCGCAAAGGT CACGACTTTT
GTGGATGCGA AACGTCCTGG TCCTCTCTCA CTTGTCATTT TTATCAACCT GTAAACAGCA
TGTGCGGGCC CAAGTTCTGC TCCATGAAGA TTACGGAAGA TGTCCGTGCG TACGCGGCCG
AGAATGGCTA CGGAGTGGAA GAGACGGCGG CCAAGGGAAT GGAGACAATG AGCGAGCTTT
ACAAGGAACT GGGCAACAAG CTCTACGTGG AAGATGACGA GAAAACGTAC GAGAACACCT
TCAATCCTTT GAAAGATCTA GCGTCCTAG
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| Protein sequence | MAGCHSSMVN AFRSVSRSLS IPSRLAVLKD PQDLVTKEAN VKPAGTRTKP TVDPFNPNFE
SIASVPYNTA FPSSTKEYKT VVHEATGHRL HVPFRRVHLE DPDQLYLDLY DTSGPQGVDP
KKGLAKLRQE WTDEREGKYE RYTQMHFAKQ GIVTEEMLYC ATRENMEPEF VRSEVARGRA
IICSNKKHPE LEPQIIGRMF KVKINSNIGN SELGSNIEDE VEKLQWSMLW GADTLMDLST
GKHIHQTREW IIRNSPIPVG TVPIYQALEK VDGIAEDLTW ECFKETLLEQ AEQGVDYFTI
HAGVLLRYVP MTVKRMTGIV SRGGSIHAKW NIFHHKENFA YEHWDDILEI CAKYDIALSI
GDGLRPGSIY DANDEAQFAE LFTQGELTKR AWEKDVQVMN EGPGHVPLHK IPENMRKQLE
WCNEAPFYTL GPLTTDIAPA YDHITSAIGA ATIASLGTAM LCYVTPKEHL GLPNRDDVKA
GIIAYKIAAH AADLAKGYPG AQDRDNALSK ARFSFRWNDQ FNISLDPVTA REFHDETLDS
DAAKSSHFCS MCGPKFCSMK ITEDVRAYAA ENGYGVEETA AKGMETMSEL YKELGNKLYV
EDDEKTYENT FNPLKDLAS
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