| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_3388 |
|---|
| Symbol | |
|---|
| ID | 7203053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011683 |
|---|
| Strand | + |
|---|
| Start bp | 122120 |
|---|
| End bp | 123076 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182160 |
|---|
| Protein GI | 219123705 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGTGGCTTGA CGAAAGAACA AGAAGCTCGG TACAGTTTCC AAATTCGTAC CTTGAGGGCA
GCTCTTGCGC TGCGTGAGCA ACTGGTCACG CTTCGAGACG GCATGCACGT GCATCCCAAG
CACCAGGAAT GGGCTGCTGC TTGTGGTGTG TCCGTGATTG TCCTACGACA GGTTCTAGAT
GAGGGGCAAC AAGCTCGCGC TGCTCTCGTG GCTGCCAACC TGGGCCTCGT TACGGCACTT
GCAAAACGAC AGCTCAGCAC GTTGCAGACC GCCACCGAAG CAGGACGTGG AGTGGGCACC
ATTCTGACGC TACAAGACCT CATCCAGGAA GGTACACTAG GATTGATGAA AGCAGCAGAG
CGCTTCGAGC CCGAACGCGG GTGGCGCTTC AGCACGTACG CGACTTGGTG GGTCCGACAG
CGCATCCTCA AGTCGGTGTC GGATTCGTCA CGAACCATTC GGCTACCGGC ACACGTACAC
GGGACCCTCC AACGCATTCA AAAAGCAAAA GCGTGGTTCC GGGCCCACGG AGAAGAGGCC
ACTCTGAGTA GTTTGGCGCA GTACCTGGAA TTGCCGGTGG AAAAGGTGCG ACTGTATACC
GACTCGTCTC GGAACGTGAT GAGTTTAGAA ACACCATTGA AGGGCCGAAG CGCTTTCAAA
GACGAGAACA CGCGGACTCT CGGGGATACG TTGGCGTCGG ACGAAAAGAC GCCGGAAGAA
AACGTCGAAG CGCAGGCTTT GCGACTGGAC TTGGAGCATG TAATGATTAA GGTGTTGACG
GATGTGGAGC AGAATGTGTT GCGGAGACGA TTCGGGCTGG AAGATGGGAC TTCTTGGTCA
TTGGAAGAAA CGGCCAAACA ACTAGGGATG TCTCGGGATC GGATTCGCCT TGTCGAAGCC
CGAGCACTGA ATAAATTGCG ACGTCCACAA CAGAATTATA AGCTTCGATC ATACATG
|
|---|
| Protein sequence | RGLTKEQEAR YSFQIRTLRA ALALREQLVT LRDGMHVHPK HQEWAAACGV SVIVLRQVLD
EGQQARAALV AANLGLVTAL AKRQLSTLQT ATEAGRGVGT ILTLQDLIQE GTLGLMKAAE
RFEPERGWRF STYATWWVRQ RILKSVSDSS RTIRLPAHVH GTLQRIQKAK AWFRAHGEEA
TLSSLAQYLE LPVEKVRLYT DSSRNVMSLE TPLKGRSAFK DENTRTLGDT LASDEKTPEE
NVEAQALRLD LEHVMIKVLT DVEQNVLRRR FGLEDGTSWS LEETAKQLGM SRDRIRLVEA
RALNKLRRPQ QNYKLRSYM
|
|---|
| |