Gene PHATRDRAFT_29266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_29266 
SymbolLhcf6 
ID7203256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand+ 
Start bp811924 
End bp812648 
Gene Length725 bp 
Protein Length204 aa 
Translation table 
GC content52% 
IMG OID 
Productprotein fucoxanthin chlorophyll a/c protein 
Protein accessionXP_002182305 
Protein GI219124007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0970766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCTTCGTCTA GGACTGTATC ACACCCAAAG TTTACCGTTT TCACCATGAT GAAGCTTGCT 
CTCCTAGCCT CTATTGCTGC TGGCGCCGCC GCATTTGCTC CGTCTCAGGG TCAGTCTGCC 
CGCGCTTCGG TTGCCACGAA CATGGCCTTC GAAAACGAAG CCGGTGTCAC CGCTCCTCTG 
GGTTTTTACG ATCCCCTCGG ATTGGTTTCG GACGGCGACG AGGCTAAGTT CAAGCGTCTC 
CGTTTTGTAG AACTCAAGCA CGGACGCATT TCAATGCTTG CTGTTGTAGG GTACATTGCC 
ACCGCGACCG GAAACCGTCT GCCGGGAACC ATTGATTTCG CTGGTACCAA GTTCTCCGAC 
ATTCCGGCCG GATTCGGTTC TTTGGCCAAC ATCCCCGCCG CTGGCCTCTG CCAGATTCTC 
TTCTTCATTG GTCTTTTGGA GACTTCCTTC ATGCGTGACT GGGTTGGTGG AGAGTCGGTG 
GGTGACTTCC GCAACAAGTA CATCGACTTT GGCTGGGACT CGTTCTCGGA TGAAGAAAAG 
GCACGTCAGT ACAATGTTGA GCTTAATCAG GGTCGTGCTG CACAGATGGG AATTCTTGCC 
CTCATGGTGC ATGAGCAACT CGGCAACGTG GACGATATCT TACCGTTCAA GCTTATCTAA 
AGTTGCTACC ACGAGTAGTT TGTAAAAGTG GTTAGAACTC CTATAACCAT TCCGACACTC 
GTGCT
 
Protein sequence
MMKLALLASI AAGAAAFAPS QGQSARASVA TNMAFENEAG VTAPLGFYDP LGLVSDGDEA 
KFKRLRFVEL KHGRISMLAV VGYIATATGN RLPGTIDFAG TKFSDIPAGF GSLANIPAAG 
LCQILFFIGL LETSFMRDWV GGESVGDFRN KYIDFGWDSF SDEEKARQYN VELNQGRAAQ 
MGILALMVHE QLGNVDDILP FKLI