Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_29097 |
Symbol | |
ID | 7202981 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | - |
Start bp | 228765 |
End bp | 229642 |
Gene Length | 878 bp |
Protein Length | 225 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182350 |
Protein GI | 219124101 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAGCATCGTT GCTCGCTCGT TGTAGTAAAC TCTCTCCACG CATCACTTCG TTTTCGTTCT CTTAGCAATC ATGGCCGAAG TGGAAGAAAC TCCGATGGAG GAACAACCTG TTGAAGAACC CCAAGAGGAG TTCGAGGAGG AAGAGGAAGA AGAATTTGTT GTCGCCGGTG GAGCAACCGA GATCAAGCTA TTCGGAAAAT GGAGCTTTGA TGATATCGAA ATTCGTGATA TTTCTCTGGT GGTGAGTGGT GGTTGAGTGT GTCTGATTGC AACAAATTCT TTTGTAGATG CTTTACTCAT TGTACCCTTT TTCTCCATCT TCAGGATTAC ATTGCCTGCA AGGGAGACCA CGCGACTTAT TTGCCGCACA CTGCTGGACG TTACCAAAAG AAGCGTTTCC GCAAGGCTTC GTGCCCGATT GTGGAGCGTC TTGCTTGCTG CCTGATGAAG AAGGGCCGCA ACAGCGGAAA GAAGCTCATG GCGGTACGAA TCATTCAACA CACCCTCGAA ATTATCCACC TGTTGACGGA CCAAAACCCC GTGCAGGTTG TCGTGGATGC CATTATCAAC TCGGGTCCCC GTGAAGATTC CACTCGTGTC GGTGGTGCCG GTGTGGTCCG TCGTCAGGCT GTGGATATGT CCCCTTTCCG TCGCGTCAAC TACGCTCTTT ACTTGTTGGC TACCGGTGCG CGGGAAGCGT CCTTCCGTAA CTTGAAGACC ATGGCCGAGT GCCTGGCGGA AGAACTCATC AACGCCGCCC GTGGGTCTTC TAACTCTTAC GCCATTAAAA AGAAGGACGA AATTGAACGT GTTTCCAAGT CGAACCGTTA AGCACTTATT TCAAGAAAGT ATAAAAGTAA ACGAGTTTTT CACGCCCC
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Protein sequence | MAEVEETPME EQPVEEPQEE FEEEEEEEFV VAGGATEIKL FGKWSFDDIE IRDISLVDYI ACKGDHATYL PHTAGRYQKK RFRKASCPIV ERLACCLMKK GRNSGKKLMA VRIIQHTLEI IHLLTDQNPV QVVVDAIINS GPREDSTRVG GAGVVRRQAV DMSPFRRVNY ALYLLATGAR EASFRNLKTM AECLAEELIN AARGSSNSYA IKKKDEIERV SKSNR
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