| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_267 |
|---|
| Symbol | |
|---|
| ID | 7202966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011683 |
|---|
| Strand | - |
|---|
| Start bp | 157419 |
|---|
| End bp | 160313 |
|---|
| Gene Length | 2895 bp |
|---|
| Protein Length | 952 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182336 |
|---|
| Protein GI | 219124072 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0986316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GAGACCTTAG TCTTGGCCGA CGACGACACC TTTGTCAAAC CCGCACGCGA TCCTCGGCAG
TACCGCGTCC TAAAGCTGGC CAACAACCTG CAAGTCTTGA TCGTCAGTGA TCAGCTCGCA
TCCGGTGCCG TGGGTGTTGA AGCGGCATCC GTCCACGTCC AAGCCGGACA CTTTGACGAT
ACCATTCCAG GCCTCGCACA CTTTCACGAA CACATGCTTT TCCTGGGGAC GGAAAAGTAT
CCCGACGAGG ACGAGTACGA AACATTTCTG TCGCAATTCG GTGGGTTTTC CAACGCCTAT
ACGGATATGG AAGATACCAA CTACTTCTTT TGCCTGACTA CGCCCAACAC CAATCCCAAC
GTCACGTCCG ATGCTCTCTC CGGAGCGTTG GATCGCTTGG CCCAATTCTT TGTCGCCCCC
CTATTCGATC CCGACGCAAC CGAGCGGGAA TGTAAGGCGA TCGATTCGGA ATACCGCAAC
GGCAAGGCCA GTGACAACTG GCGTAACTAT CAACTCATCA AGAGTACTTG TAACGATACC
CACCCGTTCG CCAAATTTGG TTGTGGTAAT TACGATACCC TCAAAACACA AGCTGGGTTG
GAGCATCTGT TGGGAGAGCT GCAACGGTTT TGGGATCGCT ACTATCAAAC GTACAATTTA
CGGTTAGCGG TAGTGGGACA CGCATCGCTG GATGCCTTAC AAGCGACCGT GGAAGAAACC
TTTGGGACCC TGGCCTACAG TGAAGGAGCT CCCCGTCGTG TCAAACGTAG AGTGGGGAAT
AAGGAGGATG GTCAGGATTT GTTTGTCCGT GAGAATGCCG TATATGGAGT TCCCGCCTAT
GGTCCCGATC AACTTGGGGT ACTCCGTCGG ATCATTCCCT TTACCGAGTC TCGCACGATC
AAGCTCCTAT TTGGTGCCCC GCCTTTGGAC GATCCGGCCG TTACAACTTC CAAACCGTAC
CGCGTTTTGT CACACATTCT GGGACACGAA GCACCTGGTT CGTTGCACGC TGTCCTGAAC
GATGCTGGCT ATCTGACCGG ACTTAGTTCC GGTATTGGTA TTGATACGTC CGATTTTGCA
CTTTTTTCCC TGTCCATGTC GCTGACCCCA CTCGGCATGC GGAATTATCC CGAGGTCTTG
GACTTGACTT TCCAATGGAT CGTACTGGTA CGATCGCGAT ACGAGAGTGA CCCACAATGG
TTCGAAGCTC ATCACGAAGA GCTGCGTCAA ATCTCGGAAG TGAACTTTCG ATTCCGGGAA
AATGGCGATC CTACTGACTT TTGCTCGAGT GCATCAGAGC TCTTGTTTGA CGAACAAATG
GAGTACTCGC GTATTCTAAA GGGCGGTTCC GAAACCTCTC TACTCGATCC CGTCGTAACC
AAAGCCTTTT TGGATCGATT TCGTCCAGAA AACGCAATGG TGCACATCGT CTCGTCCGAC
CTGAAAACAA CGTCATCCGA CGACTCTAAC GGCTCGATTT GGGAAACAGA GCCATGGTAC
GGTGCGCAGT TTCAGGCAGA GCGCTTGTCG AACGAACAGA TAGAAACGTG GGGAAGCTAC
TCTCCCGAGA CGATTGATGC GCGGTTGGCG CTACCGGGTC TAAACAACTA TATCCCGACC
GACTTTTCTT TACGATGTGA CGAAGAAGTC GACGCTAAGA AAGAAACCCT CACCAGCGAC
GAAATTATGG TACCTCCCGT TTTAGTGCTG GATCGTCCAA ATTTACGATT GTGGCACAAA
ATGGATCGTT ACTGGCGTGT CCCAAAAGCC TTCATTCGTG TTGCCATTCT TTCTCCCAAT
GTGTATCGAT CACCACGATC AATGACATAC AATCGCATCT TTCAACGAGT TTTGAGTGAT
GATCTCAATT CCTTTGTTTA CGATGCCTCC ATCGCAGGAT GTAATTACCG CGTCAGCTGT
GCACCTAGTG GATACCGCAT TTCGGTTCGT GGGTACTCAG AGAAATTGCC CTTTTTGCTA
GAAACGCTCA TGTCCCGGAT ATTGAGCCTA ATTCAAGAAA TGAAGGGTGG CGACCCAGAT
TTGCGCAAGC GCTTTGCCAA GGCACAGGAA AGTCTATTGC GAGAAACGAA GAATTACCGC
TTGGACACGC CGTACGAAGT TGCCAGTTAC AATTCGCGAT TGTTAATTGA AGAAAATGTT
TGGTATTTGG ACAACTACGT CGACGAGATG GAAGGAGATG CTGCTTTGCA CGATCCCTTG
ACCATGGAGG AATGCGCCCA AGTTGCCGAG GATTGTGTCA TGGGACGTTT GAAATGCGAG
GCCCTATGTA TGGGGAATAT TGATCAGAAG CACGCACTGG GCATTTCCGA GGTTTTGGAC
CGCGTCTTCT TGGACAAGTC ACGCACCATT TCAGAAGTCG AGACACCGCG TTTCCGATCG
CTCAAGTTGC CGACGCGGGA TGAAGCCTCA CTAATTTTTG GTGACGCCGT GGTGAATCGG
ACGTTGCCCA TGATCTATGC CGATCTCGCT CATAGCGCTT CGGAGGAAAA TAACGCGGTA
GAAGTCATTC TACAAGCCGG TAGCGAGCTT GAACTGGGCT ACGAAGGTCT TGCCACTCTT
GATTTGATCA CCCACATGGC TTACAATTCT GCCTTCAATC AATTGCGTAC CAAGGAACAG
TTGGGTTATA CAGTGAGCGC GTTTCCGCGT AAGACTGCCG GTACCGCTTG GGGCCTGTCG
GTTGTTGTCA TGGGCAGTGC CGCCCTCCCC GAGTACATGG AAGAACGATG TGAAGCTTGG
TTGGTGCAGT TTCGTCGAGA GCTGGAAGCC ATGACGCCGG ATGCCATGGC GGTGGAAGCG
TCGGCTATCG TCGCGCAACT GCTGGAGGAA GAAACCAAGC TGTCCCAAGA GGTTTCGCGA
GTATGGGGAG AAATT
|
|---|
| Protein sequence | ETLVLADDDT FVKPARDPRQ YRVLKLANNL QVLIVSDQLA SGAVGVEAAS VHVQAGHFDD
TIPGLAHFHE HMLFLGTEKY PDEDEYETFL SQFGGFSNAY TDMEDTNYFF CLTTPNTNPN
VTSDALSGAL DRLAQFFVAP LFDPDATERE CKAIDSEYRN GKASDNWRNY QLIKSTCNDT
HPFAKFGCGN YDTLKTQAGL EHLLGELQRF WDRYYQTYNL RLAVVGHASL DALQATVEET
FGTLAYSEGA PRRVKRRVGN KEDVPAYGPD QLGVLRRIIP FTESRTIKLL FGAPPLDDPA
VTTSKPYRVL SHILGHEAPG SLHAVLNDAG YLTGLSSGIG IDTSDFALFS LSMSLTPLGM
RNYPEVLDLT FQWIVLVRSR YESDPQWFEA HHEELRQISE VNFRFRENGD PTDFCSSASE
LLFDEQMEYS RILKGGSETS LLDPVVTKAF LDRFRPENAM VHIVSSDLKT TSSDDSNGSI
WETEPWYGAQ FQAERLSNEQ IETWGSYSPE TIDARLALPG LNNYIPTDFS LRCDEEVDAK
KETLTSDEIM VPPVLVLDRP NLRLWHKMDR YWRVPKAFIR VAILSPNVYR SPRSMTYNRI
FQRVLSDDLN SFVYDASIAG CNYRVSCAPS GYRISVRGYS EKLPFLLETL MSRILSLIQE
MKGGDPDLRK RFAKAQESLL RETKNYRLDT PYEVASYNSR LLIEENVWYL DNYVDEMEGD
AALHDPLTME ECAQVAEDCV MGRLKCEALC MGNIDQKHAL GISEVLDRVF LDKSRTISEV
ETPRFRSLKL PTRDEASLIF GDAVVNRTLP MIYADLAHSA SEENNAVEVI LQAGSELELG
YEGLATLDLI THMAYNSAFN QLRTKEQLGY TVSAFPRKTA GTAWGLSVVV MGSAALPEYM
EERCEAWLVQ FRRELEAMTP DAMAVEASAI VAQLLEEETK LSQEVSRVWG EI
|
|---|
| |