Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_21988 |
Symbol | PPdK |
ID | 7203153 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | - |
Start bp | 327755 |
End bp | 332252 |
Gene Length | 4498 bp |
Protein Length | 1011 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182372 |
Protein GI | 219124147 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACACTGATTA ATGCGTTCAA TCCTTAAACA TGACAAAAAG CTGTCCACCA CTCCAAAACT CGTCGGATAT TTTGCAAACA GTTGATTTAT ATCAGCCATG GTTACTTCGA CAAACCCATG ACAATCAGAA GTACCCTTGC GAAGACGAAC GTCACGATTG ATTAACATAA AGTATAAAGC ACCGCAGCTT TCCTTAAAAG GTTGCAACAA TCGAAAAACG GACTGGATTT TCGAGAAGCT ATTACATAGG GAAACCTCCG ATCTAAACCG CAGAATACAA CAGTATACGG TATAGTAGAC ATAGTCCGAG ACGTGTTACA TGCACATTGT CGAGCAGCGG GACCCCGTAT AAATCCCACA ATTTTGCGCA TGCTACGTTT GTGAACGTTT TGTCGCCATT TCTCGGTCAA TAGGACAGGC AGCTCGGTGA TGTCGCGTTC CTATTTTTGA TGGACCTTGA AGGTGCATTG TAAGCTAGAA TGTCTGTCGT TGGGGATGTG CAGCTGTCAA AGTGTTGATG AACGAGGTGC TGATCAATCC GAGCCAGTCT TATATTGCGA AACGGAACCA GGTTTGCTCC TCGGACATTA CATCTTCGCA AAACGCATTC GGCGGAATGG TCGGTCGCTT TTGTCCTCCT CCGGGAGCAC CTCCGAACAA GGGGAATTTT CCGCACCGTT CGTCTATGTA GTCAAATCTG CTCTCACTGT CAACCATTGG ATCCGATCAG AGATTTACCG ATCGCTGGAT CATCGAAACT GATCTAAGGG GTCCAGTCTT CGCATTGGTT CACTCTGATT GACTGTGACC GTGACACATC GAGTTTTTGA TGAAAAATCG AAGGTGGTCG AAGTTTCCAC GATGACGTGG ATTCGGAAAT TCTGTTTGAA GCAATTACGT CACGCTGACG GGATACTGAC ATCACGGAGT GAGAAGCGCG ATCTTATTTG TTTCGAGGCG CAGAAAACCA TGTCTGACCA ATCTTCTCCT TTGCCACGTC ATCTGCAAAG ACACGACCAA TCGCAGAAGC GACTCGCCAT GAGCCGCTTC TGATGGCCCA TCGAAAATGG CCGCATCGAT GGATTTTCTC CGAATACAAT TTTCACACAG ACACACAAAT CAAACTAACG GTAAAGCGTC GAGCTTATTC GTTACCCGGG TTCAAAACAC AAGCTCCAGT TTTTAATCTC CGACAGATAT TCCTTACTGC TAGGTTGGTA GTGTAGACAG CACAGTGAAG TTATGAAGTT TTCTTCAGCT GCCGCGACGA CGGTAGGACT TTTGTTAAGT GGACATGCGC CGATGATTTT CTCCTTCGTG ACACCCCCTT CGCGCTTCGC ATCCGGCCAT CAAGCCAGTG GATCCGAACG ATCTATCATC AGCCACTCTA CGGAATCTTC CAGTTCGTTG ACGTCCCACA ACACAAATGA CAGTCGTTCG ATCTCCAGCA AAATGCAGTT TCCGCTCTTC ATGACGGCCA CGTATTCTGA AGCCGGCAAG AAAAAGACTT CCACAATTTC GACGACAGGC TCTAACAGCA TGGTCTCCGA ACAAGAGGAT AGCAAGCACG GCATAGTCCC CTTCGGCGGT TCTGCGGCTC ACGTGAAAAC CCCCGACAAG CAAATCTTGG GTGGCAAAGG CCTCGGCTTA CAGGAAATGA GTTACGTTGG CATCGACGTG CCACCCGGCT TTACACTCAC CACGCCTCTC TGTCAGGTCT TTCAAGAGAA CGGCGACTTG CCTGAGGAAA TGTGGAGGCA AGTCGAAGCC GCAATCCAGC GGGTTGAGCA AGACATGGAT CGTAAATTTG GAGATCCCTC TTACCCACTT CTGTTCTCTT GTCGCTCGGG CGCGGCCATT TCCATGCCTG GTATGATGGA CACCGTCCTC AATGTGGTAC GTTCGCAATG GACACTCGCT TTGGATGCTT TCGCTGACTT CTGTTTCTAA CTCGACTTCT GCACAAATCG TACCCGTTTC TTCAGGGATT GAACAAAGAA ACCGTTGAAG GGCTCGCCAA GGCAACAGGT AACAAGCGTT TCGCTTACGA CTCCTTTCGT CGTTTGCTAG ACATGTTTGG TGACGTTGTC CTTGGCATTC CGCACGAAAG TTTTGAAGAC AAGCTCAAAG GCTTGAAAGC TAAGGTTGGT GTACAGGACG ATATTGATTT GACGGCTGAG CACCTCAAAG AACTTTGCGA CCTTTACGAA AAGGTTTACG ACGAACACGG CAAGGAGTTT CCCCATAATC CGATGGATCA ACTTAAGGCT TGTATCAAGG CAGTCTTCGG GTCTTGGAAT TCAGGTCGAG CAATCAAGTA TCGTGAAGTG CAAGGAATAA CTAGTTTACT AGGAACAGCC TGCAACATTC AGACGATGGT GTTTGGAAAT CTCGGACCGA CTTCGGGGAC GGGAGTCGCG TTTTCGCGCG ACCCGGGCAC CGGAAAGGCC GTGCTAAATG GCGAGTACTT GGTCAACGCA CAGGGTGAAG ATGTGGTAGC CGGTATTCGT ACGCCCGAAC CAATTTCCAC AATGGAAAAA GGATTTCCCA AGGCCTATGA ACAATTCATT CGTAACGTGC ATACCCTCGA GCAGCATTTC AAGGACATGC AAGATGTCGA ATTTACCGTC GAGAACGAAA GGCTGTGGAT GTTGCAGTGC CGCTCTGGTA AACGCACCGG ACAAGCCGCA CTGAAGATTG CTTGCGATCT GGTCGACGAA GGCATTTGCA CTCCGGAAGA AGCCTTGCTC AAGGTAGAGC CTGATCACGT CAAGCAAGTA CTGCACCCAA CGTTCTCGGC CGAAGCCTTG GAGTCAGCTG TCTACAAGGA GAATGTAGTG GCAGTTGGCC TTGCCGGTGG TCCCGGGGCT GCCGTTGGCA AAGTTGTCTT TTCTACGGAA ACCGCCGAGG AAATGACGAA GGAAGGTGTC ATACTGGTTC GTGAAACGAC GTCGCCAGAA GATGTCGGAG GAATGTGGGC TTCTCGAGGT ATCGTCACCT GTCGTGGCGG AGTCACATCT CATGCGGCAG TTGTGGCTCG TGGGTGGGGT AAGCCCTGTG TTGTTGGTTG TGACGATATC GATGTCGATA TGAAGACCAA GACTATGACA ATTAAGGAAA CGGGCGAAGA GTTTAAGGAA GGAGACGTTA TCTCCATCAA CGGAAGCACG GGTGAAATTG TTCGTGTCGC GATCGAGACC ACAGTCCCAG CTTTGGAAGG CGAGTTCGGC AAACTTTTGG GTTGGGCGGA CGAGGTCCCT GACGTATGCC GAGTCATGGC GAATGCCGAT TCTGGAGCTG ACGCCCAGAA GGCTCGTGAT CTTGGGGCCC AAGGTATCGG TCTCTGCCGT ACCGAGCACA TGTTTTTTTC ACCAAGTCGT CTTCCAGTTG TTCGACGGTG GATCCTGCGG GACGAGGGTC TGGAACAGGT CCAAGAATTC CAGCGGGAGG ATTTCCGCGA GATTATGCAT GTTATGGACG GAAAGCCGGT CACTATTCGT CTTTTGGATC CACCTCTGCA CGAATTTTTG CCGCACTCGA GTGAGATCAA CGAGAAACTC TCGAAACAAC TAGGCTATGA TGATAGCCAA GCGTTGGCCA GCGATATTGA AGCCATGCAC GAGGAGAATC CAATGTTGGG CTTGCGAGGA TGCCGTTTGG GGATTGTTCG CGAAGGCCTA ACCGCCATGC AGACTGAGGC GATTATTCAT GCCGCGGCGG ATTTGATTGA GAAGAACAAT GATGCGAAGC CTTATCCACG GATTATGGTG CCGCTGATTG GGAGCGTCGC CGAGTTCAAG AATCAAGCAC TTCTAATCAA GCGTACTGCA GAACGTGTCA AGAAAGAGCG TGGAATTGAC GTGCCTTACG AGATTGGTAC TATGATTGAA GTGCCACGGG CAGCGCTAGT TTCGGACCAG ATTGCAGGAG TGACCGATCC GGAAGACGGA AAGCGACTCT GCGAGTTCTT TTCGTACGGA ACCAATGATT TGACACAAAT GACATTGGGA ATTTCACGGG ACGATGCCGG TGCTTTCCTT CAGGTATACA AGGATCTAGG CATAATGGAA GAAGACCCTT TCAAGTCAAT TGATACTGAG GGTGTGGGTT TCTTGCTTCA TCTTTCGGCT GCTAAGGGTC GAATGGTCAA TCCAGAGCTT TCGCTGTCCA TTTGTGGAGA GCATGGTGGT GATGCGGCCT CGATTAAATT TTTTGACAAG GTTGGTTTGG ACTACGTTTC ATGCTCGCCT TTCCGTGTTC CGGTTGCCCG ACTTGCTGCT GGACAAGCTT CGGTGAAGCG GCGCAAGGAC GAAATAGAGC CTATGAGCCG CAAAGACCGT GTTGTCAAGA CTTCGCCCAT GGCGTAAACG AGAGGAATCA TGTTTTTTCG GATGGTTGAC ATGCATTCGC GTTTGCTTTC TAGCAGAGAG CTTTATGCAG TGGTTTGTGG TCGTCTATAT TATTGTAAAG AGAATAACAC TTCAGATCAC GCATTTCG
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Protein sequence | MKFSSAAATT VGLLLSGHAP MIFSFVTPPS RFASGHQASG SERSIISHST ESSSSLTSHN TNDSRSISSK MQFPLFMTAT YSEAGKKKTS TISTTGSNSM VSEQEDSKHG IVPFGGSAAH VKTPDKQILG GKGLGLQEMS YVGIDVPPGF TLTTPLCQVF QENGDLPEEM WRQVEAAIQR VEQDMDRKFG DPSYPLLFSC RSGAAISMPG MMDTVLNVGL NKETVEGLAK ATGNKRFAYD SFRRLLDMFG DVVLGIPHES FEDKLKGLKA KVGVQDDIDL TAEHLKELCD LYEKVYDEHG KEFPHNPMDQ LKACIKAVFG SWNSGRAIKY REVQGITSLL GTACNIQTMV FGNLGPTSGT GVAFSRDPGT GKAVLNGEYL VNAQGEDVVA GIRTPEPIST MEKGFPKAYE QFIRNVHTLE QHFKDMQDVE FTVENERLWM LQCRSGKRTG QAALKIACDL VDEGICTPEE ALLKVEPDHV KQVLHPTFSA EALESAVYKE NVVAVGLAGG PGAAVGKVVF STETAEEMTK EGVILVRETT SPEDVGGMWA SRGIVTCRGG VTSHAAVVAR GWGKPCVVGC DDIDVDMKTK TMTIKETGEE FKEGDVISIN GSTGEIVRVA IETTVPALEG EFGKLLGWAD EVPDVCRVMA NADSGADAQK ARDLGAQGIG LCRTEHMFFS PSRLPVVRRW ILRDEGLEQV QEFQREDFRE IMHVMDGKPV TIRLLDPPLH EFLPHSSEIN EKLSKQLGYD DSQALASDIE AMHEENPMLG LRGCRLGIVR EGLTAMQTEA IIHAAADLIE KNNDAKPYPR IMVPLIGSVA EFKNQALLIK RTAERVKKER GIDVPYEIGT MIEVPRAALV SDQIAGVTDP EDGKRLCEFF SYGTNDLTQM TLGISRDDAG AFLQVYKDLG IMEEDPFKSI DTEGVGFLLH LSAAKGRMVN PELSLSICGE HGGDAASIKF FDKVGLDYVS CSPFRVPVAR LAAGQASVKR RKDEIEPMSR KDRVVKTSPM A
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