| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47695 |
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| Symbol | |
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| ID | 7202703 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011682 |
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| Strand | + |
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| Start bp | 554174 |
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| End bp | 555638 |
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| Gene Length | 1465 bp |
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| Protein Length | 418 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181932 |
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| Protein GI | 219123231 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00130842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCAGCTGCA GCTGGAGCTT ATCTTGGTGC AGAATAAACA AAAAAGGACA GGCAAGCGTT
TGTGAATTCT GGCATTGTCG AGATCGCTGA CCAAGAAATT TCCATTCACG CTGAAAAATG
AACGTTTCGC TCATAGGCAA AATAAAAAGA GGTATTAAGG AAATTTGCTC GGCAACGAGC
AATAATTCAT TTCCAGCCGT TGTCGACAAT CCATGTTGGG GTCTGCCGAG CCAATGTTCC
TTGTCTGACT TGCTGCGATG CTTTGAAAAG GATAAAGTGG TCGTGTACGA AACTGATCAT
TTTCTAGCCT TGAACAAGCC ACCGGATCTT CGAATGGATG GACACCACCC TTCGACGGTA
CTCAAGCTCC TAACCTATTG GTATCCTCCT CCTGCCTTCC AAAATCTTCA GAGTAAGGGA
CTTCTGGAAA AGGTTAGCGA GTTTGAAAAC TACAGGAATA TTGAAGGCAA TGAGCTTAGA
CCCTGTCACC AATTGGATTA CGCAACGTCA GGCATCCTTC TCGTCGCTCG GAATCGGCAA
GCAGCGGATC AAGCTCGAGT TTCATTTGAA GAGCGGTCCA CTCGAAAAAC TTATTTGGCA
CTCGTCCACG GCCACCTATC GGTACCAAGC AATATTCCGG TCATGAGGAG AACGGACATT
GATGAGCGAA TGGGTCGGCT GGAGGAAATA TACCGACAGA GTCGTCGCAA ACACCGGAAG
GACACATATA GAGGATATCA GCCTGCCCAT GGCTTGTTTC AGCAGCTCCA GCAACAGCAC
AGTAAAAGAG CAAAAAAAGA AAAAAAATCG ATTATCAGAT TCCGAGTGGA AAACTGTTTG
GAATGAGCTA CAGTTTACTA AAACAGAAAC AGACCATATC CTTAATTTAA GTTGGAAGGA
GGTGAAGGCG TCCGGAAAAA CTGAACCTTT TGATCGCGCA GCAGAAGTAT TCAACAAACT
TCAATACAAA ACGTTGTTCC CCGAGGATAA AAGTGCCGAG TTGTCGCTCC CGACTTTCTT
TCGCGATGAA AGTGAGGACC CAAACACACT CTTCATTTAT GCTTCTGTCG CACAGGTTCC
TCACGATTTT GCCATGCGAA TAAATCCAAG CATGTCGAAT GCCTCTGCAT ATTTGAAGGT
TGGGGATTCA TCCCTGGACT ACAAGCCGTC TCTCACACGA TGCGTGATTC TTAAGCATGC
TGCCATTAGA GGGCAACCGG TTACAAAAGT TCGTCTTGAG CCTCGAACTG GGCGACGTCA
TCAGCTACGA GTACATTCCG CATTGTTAGG GCACGCCATA GTTGGAGATC AAACCTACAA
AGCCCCAGGC TCTCCCGACC TAACGGATCG CATGTGTTTG CATTCTCAAT GTCTCGAAAT
TCCACTTTTT GAGGAGTTAA TCAAAGTCGA AGCACCAGAT CCCTTCCTTG TAAAGAACCG
TGAGATATTG GTACAGCATC TATGA
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| Protein sequence | MNVSLIGKIK RGIKEICSAT SNNSFPAVVD NPCWGLPSQC SLSDLLRCFE KDKVVVYETD
HFLALNKPPD LRMDGHHPST VLKLLTYWYP PPAFQNLQSK GLLEKVSEFE NYRNIEGNEL
RPCHQLDYAT SGILLVARNR QAADQARVSF EERSTRKTYL ALVHGHLSVP SNIPVMRRTD
IDERMGRLEE IYRQSRRKHR KDTYRGYQPA HGLFQQLQQQ HNHILNLSWK EVKASGKTEP
FDRAAEVFNK LQYKTLFPED KSAELSLPTF FRDESEDPNT LFIYASVAQV PHDFAMRINP
SMSNASAYLK VGDSSLDYKP SLTRCVILKH AAIRGQPVTK VRLEPRTGRR HQLRVHSALL
GHAIVGDQTY KAPGSPDLTD RMCLHSQCLE IPLFEELIKV EAPDPFLVKN REILVQHL
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