| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47592 |
|---|
| Symbol | |
|---|
| ID | 7202647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011682 |
|---|
| Strand | - |
|---|
| Start bp | 195191 |
|---|
| End bp | 196390 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182023 |
|---|
| Protein GI | 219123420 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.823619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCA ATCAGAAATA CTTCAACGCC TCACTGTTGC TGGTATGTTC AACTGTATGT
ACCCTGTTCC AGTTTCGTAT TCTCTATCAA ATGGGCAGAA GGGCAGTCTT CCCCGGATCC
AACTCAGGCG ATGAAGGACA GCAAGATCTG GAGTCGTGGC AGTTGCGTCC AAAATCACTT
CGCACCGTGA TTGTGCCAGA GTCACCGACT AGGACGTGCG CCATCAATCT CTACGGGTTG
CCAAGAGCCT TTGAATCCCT TGCTTTACCG ACACTCATAA AGAACGTGAT TCGTCCCAAT
GCTATCAATG GTTGCGACTA CTTTGTGCAC TACTATTACT TGACAGAAGA AATGCCGGGG
CGGTCCGGCG AAGGAGGTCG CATAAATCCA AATGAGGTAG TGAAGTTGAA GCAAGCAGTT
CAAGAGTTCT CTCCAAAGTC AGTTATTCAA TTTCGCTACG ATAAGGAACA GGCCTTTTGG
GATCAATATC AACCGCTTAT TGACAAAATC CGAGCAAGCA ACGATACGGA TGGAAAATTC
TTATACTTTC CGTGGCGCAG CCCATCGTAT GTATACCCAA TCACTACTGA TAACATTGTT
AAGATGTGGC ACAGCATTCA GTCAGCGTGG AGTTTAATGA CGCTGTACGA GACTCTGACA
ACCCGAAAAT TTGACAGAGT TGCGATGCTA CGCTTGGATG TCGTCTACAT TACACCAATC
AACGTATTTC AAGTGAATCG ACGAGAGGTT GGCAAGAATG AAAAAGTGGC CTTAATACCT
GGCTTTGGAC GTCATCCCGT CAGCGATCGT TTGATTATTG GACCACGAGA GGCGATCGAA
ATTTGGGCGT CGCAGCGATT TGATCGTCTC GAGGAGCACG TGAAGTTCGT ACACGAGAAG
CATCCGGGCT GGGGTATGCA TTCCGAAATG TTTCTCCATT GGACAATCTT CCCGGCCATT
CGAGACACTG GGACGAGCAT CGTGGAAGAC GACAGTTTGT GCTTTTTTCG GGCGCGCGCC
GACGAGTCGG TATGGGTTAG TGATTGTGGT GGGAAACCGG AGTATGCCAA AACCTCCATT
TTGAAGAATC TTGGTGGGGA CAAAGTTGAA GTATTGGAAT CGGTACTCGG ACGGAAATGC
CGAGGCGAAG CTCAGAATCT TTCTTGGTCC TTTGTAGCCC TGGGCTGTCC AGCAGGGTAG
|
|---|
| Protein sequence | MPINQKYFNA SLLLFRILYQ MGRRAVFPGS NSGDEGQQDL ESWQLRPKSL RTVIVPESPT
RTCAINLYGL PRAFESLALP TLIKNVIRPN AINGCDYFVH YYYLTEEMPG RSGEGGRINP
NEVVKLKQAV QEFSPKSVIQ FRYDKEQAFW DQYQPLIDKI RASNDTDGKF LYFPWRSPSY
VYPITTDNIV KMWHSIQSAW SLMTLYETLT TRKFDRVAML RLDVVYITPI NVFQVNRREV
GKNEKVALIP GFGRHPVSDR LIIGPREAIE IWASQRFDRL EEHVKFVHEK HPGWGMHSEM
FLHWTIFPAI RDTGTSIVED DSLCFFRARA DESVWVSDCG GKPEYAKTSI LKNLGGDKVE
VLESVLGRKC RGEAQNLSWS FVALGCPAG
|
|---|
| |