| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47572 |
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| Symbol | |
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| ID | 7202797 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011682 |
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| Strand | + |
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| Start bp | 147957 |
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| End bp | 149547 |
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| Gene Length | 1591 bp |
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| Protein Length | 407 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181854 |
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| Protein GI | 219123069 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0059247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACGAGTTCT CCAACACCTC GATACCCAAG TCTCGAAATC CCTCTCCACA AAACATACAA
CCATGGTCTT CTCTACCCCT GCCAAAGTCT TTGCCACTGC GCTCGCCATG GGTGTTCTGG
TTGCCACCCA GATTGATCTG ACGTCGCAAA AGGTGAGCTT AATTTGGCGT TGCTCGGCGT
TGGTGAACGT CTTCCCCTTG TAGATCCGAC CCCGATTGAC CTGACTGTCT ACCAAGTACG
TGGACATGGA TCTAACAACA TGTTTGCTAA TCTTCAGAAC GGTGCTGCCA ACGGAATTGC
GTCCGACGCC GACGCTGCTT CAAAGCCTAC AGGAGCTTCT AGCCGCGGCT TGAAGGGTGC
TCGCCGTTTG GCTACCGGAA ACGTCGAAGG ATACGGAAGG GTCAATGCCA CGTCCGGAAC
TCTCGTCAAC GGCTTTGCCG GCCCCGGAGA GAGCTCTCAG TACGCTGCCG TCAAACAGAC
GGGATCCTTC GACATCAGAT CATTTGCCAC GGGTCCCAAC GGATTTATTG AAGGATCCAG
TAATGGGGCG GTTTACCATA CCGAGCTGAA AACGATTGGT GAGGCTGACT ACTACGGTCA
GGTTGAGAAC ACCGGAGCCA CTGTCGAGTC CTACGGTACC GGCTACTTTG CCGGAAACTT
CGACACGGAA GGGTCCGCAC CTGCTGGACC CAACGCCACG ACCGCTCCTG GAGCCACGAT
GGCACCCACC AGTGCCCCTG TCGCCACGTC GTCCACCAAG GCACCCAAGG CTTCCATGGT
ACCCAAGAGT ACTGCGGCAC CCAAGAGCGA GAAGGCTACC CTTTCACCGA AGAGTGCCAA
GGGCGACACC ATGAACATCG AGGTGCCTCC CCCCGAGCCG CGCACTGCGA CGGCGGACGA
GGGGGCCGTC TCGCCCGACG CTGTGACCGG CTCGGTGTAC TCGGTGGCTG GAGGCACTCT
CAAGTCGACT TTCACGGCTC AAGGGAGCAC GTACGTGTAC GCCCCGGCGG AAATCATCGG
TGGAGGTCTT GACATTGGTG CCTCGGAAGG ACAAGTTGGC AGCGCAAGTG GTCTTACTTC
TGTTGGTGGC GACATCTTTG ACGACATTGC TACCATGATG CCAGACGATG CTACCGTGAG
CCCCCTTGCG ACCGTCAGCG AAGGGCTCGC TACCGCGAGT CCTGGAAGCG GCGGAGCTTC
TCTTACAAGC TCGTCCTCCG CTTATGGTTA TGCCAACGAA TTCTTTGCGG ATGCCGAGGC
CGCTGGTGAT CTGACCCAGA CCGGATCGGC TACTGCTTTT GCCTATGGAC CGAGTGCTGG
TGAATACTTG CCCGGTGGTA ATTCGAGCAC ATACGCGGAT TCGTATGCCA CGTTTGGTGT
TTCGGGAGAG GCGGCGGCTC CTAGTCCCTA AGCTGTGAAT GTTTGCTGGT ACATCCTTTG
ATGTGAAAAA GCGTACGTAG TATGTGATAC TGCTACAATA CACATCTCAT TTCGTCATCA
GACCTTGAGC TGGAACAAGA AAGAAAGATG ATGGATCTGT TGTCAATGTA GTAGATATTT
AATAGTAAAA AGGAAAATGA TTGATTATCT T
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| Protein sequence | MVFSTPAKVF ATALAMGVLV ATQIDLTSQK NGAANGIASD ADAASKPTGA SSRGLKGARR
LATGNVEGYG RVNATSGTLV NGFAGPGESS QYAAVKQTGS FDIRSFATGP NGFIEGSSNG
AVYHTELKTI GEADYYGQVE NTGATVESYG TGYFAGNFDT EGSAPAGPNA TTAPGATMAP
TSAPVATSST KAPKASMVPK STAAPKSEKA TLSPKSAKGD TMNIEVPPPE PRTATADEGA
VSPDAVTGSV YSVAGGTLKS TFTAQGSTYV YAPAEIIGGG LDIGASEGQV GSASGLTSVG
GDIFDDIATM MPDDATVSPL ATVSEGLATA SPGSGGASLT SSSSAYGYAN EFFADAEAAG
DLTQTGSATA FAYGPSAGEY LPGGNSSTYA DSYATFGVSG EAAAPSP
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