Gene PHATRDRAFT_47527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47527 
Symbol 
ID7202771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp23043 
End bp24499 
Gene Length1457 bp 
Protein Length381 aa 
Translation table 
GC content54% 
IMG OID 
Productn-acetyl transferase 
Protein accessionXP_002181984 
Protein GI219123339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGCGAACGGA AGACGACACC GGCGTCATCC CTATCTAGAT GTTGTAAGGA ACACCGTCTG 
TATCTCTCGG CAGCCTTTGT TTCCTTACAA CCTACCCTTT GGAATTTGCC TGTCAACAAA
CGAACATCCG ACTGTGTCGA GATAGATTGC CTCGTTTGCA ACTTCAACCG GACTAACGAC
AGTCCAGTAT TCCTAGTACG AAGTCTGGTG GGGAACACTG TCCCGAGCAA CTATACTCAC
ACTACACGGG ACTTGGTTTG TCTCCTCTGC TGCGTAGTTG GTGAGCATAC AGGATCACGT
AGTCGGGAAT CATGAAACGC CCGACCGATC AAGCCAAACT CTTATTTCTG GGCCTCCTCC
GGACGGCTTC GGCGTTGGCG ACCGAGCCAA AAGTCGGTGC GGCGTCTCTT TCGTACGCGT
CGTCCCACAC AGCCGCTGCC ACGGCGTCGG CTTCCGTCTG GCCGCATTCG CGTCAGTCGC
CCACACAACC GCAGCAGCAC ATTACCTTGC GGCTCGCCCG CAAAACGGAC ATTCCTGGGT
TGCAGGCCTG TAACATTGCC ACGCTTCCGG AAAACTACAA TCCCCAATTC TACGCCAATC
ATTTGCGCAC GTGGCCGGAA CTCGCGCTCG TGGCGGAATG TCACGAAGAA CTGGATCTAG
ACGCGCGTAC TGAACGGGAT AAGAGTCGCC ACTCCCCCAC TCCACTCTCA TCCTATTCAC
CATTTGGGTA CACCTTTCAT CATCTCGCCA ACGGACACGG CAGCAGCCAC AACAGTAACA
ACCCTAGCCG AGACGCGAAG AGTGAATCCA ACATTGTCGC CTACGTAATC GGAAAAGTCG
AAGAACGTCA AGTTTTGCTC GACGACGACC ACTGGCAACC AACCGAGCAC GACATGTACG
GCATGCCGCG TCGCCGGTAT GTGACGCAAA AATTGGGGCA TGTCACGTCC TTGGCCGTCT
TACCGTCTCA TCGTCGGCAG GGGCTGGCGC AGACACTCAT GGAACAGCTG CACTATCATT
TGATCTCGTG TTACGGAGTT GACTCAGTGG GTCTACACGT GCGGGTTAGC AACGAAGCGG
CGGGAAAATT GTACTCTCAA CACGGCTATG AGGAAGCGGA GCAGATTTCG TCCTACTATC
AAGACGGAGA GGATGCCTTT TTTATGAAAA AAATATTGAG TGACGGCAAT CGCAACCGGC
ATGAGAACAT TCCGCATTTT TCACCGTCCC ACTCCTCCCG TTTGAATTTG TTCGGTGGGG
CCTTGCGCAA AACACCCAAG CCGTGGCAAG AAGGGCCCAT GTCGTTGCGA TTGCCCCGGG
TTCTAGTAAA CAACGGTGGA GTGGCCGCGG AAGAGCCAAC GCATTCGCCG CAAGCATCAC
CCACAGATAC CACGCACCGT CGCAACTGTG ACAACAACCA CGATCACATT CCTGAACTTC
TAACCGGAAC TATGTAA
 
Protein sequence
MKRPTDQAKL LFLGLLRTAS ALATEPKVGA ASLSYASSHT AAATASASVW PHSRQSPTQP 
QQHITLRLAR KTDIPGLQAC NIATLPENYN PQFYANHLRT WPELALVAEC HEELDLDART
ERDKSRHSPT PLSSYSPFGY TFHHLANGHG SSHNSNNPSR DAKSESNIVA YVIGKVEERQ
VLLDDDHWQP TEHDMYGMPR RRYVTQKLGH VTSLAVLPSH RRQGLAQTLM EQLHYHLISC
YGVDSVGLHV RVSNEAAGKL YSQHGYEEAE QISSYYQDGE DAFFMKKILS DGNRNRHENI
PHFSPSHSSR LNLFGGALRK TPKPWQEGPM SLRLPRVLVN NGGVAAEEPT HSPQASPTDT
THRRNCDNNH DHIPELLTGT M