| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38066 |
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| Symbol | |
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| ID | 7202748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011682 |
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| Strand | + |
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| Start bp | 792236 |
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| End bp | 796795 |
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| Gene Length | 4560 bp |
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| Protein Length | 1519 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181977 |
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| Protein GI | 219123325 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00336128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGA AACCATCGTT TTCGGTTGAC ATTTGTGCCA CTTGCATCAC GTCCAAAGCG
CCTCCTTTGC CGTTGCGAGA GGAACTCCCC TCGTTGGGAT TCGAAATCGT TTACAACGCC
GGTGGTCTGG GAGCGAAGGC GAGCAAACAC GAAACCAAGA TAGCGTTGGA TCAGTATCGG
AAACAATGCC AAACCAAAGA ACTCAAAAAA CGACGATTCT TTCCCAAGAG TTCGAGACGA
ATCAGAGAAA CCCTGTTGGA GCGGAAAAAG ATTGAGCACC AGCTCAAGAT ACCCCATGCT
CTCTCCTATG CAGCATACGA GCATAGATTG GCCCGTCTCG AGGAGAAAAG TTGGACGTCA
ACTTCGACTT CCTTCACGCC CACTACGCAT GCGAGCTCCC ACAAATCGAT ATCGTTATAC
AAGTACAAAG ACGGCAAGAA GCCTTTCACA AAACGATGCA AGGGAAGATG GGGTATTTCG
CTGCGTAGAC GTATAGGCTC GAATCGTAAG AAAGACACGA AAAGTCTTCC TTCCGAAACA
TCGGAATTTT TGCAGACTTC AAGCATCAGG GATACTATCG GTAAGGCCGC CTTCGGAGAC
TTTCTTGTGC CTGTGAATTC ATCATCGCAC GAAAAGGAAA ATGGCGTAGA TTGCGGCATG
TATACCAAGC GCAATCCACT GAAGTGGAAA AGGGCGTTTG ACTCAGAATC TTTCGACAGC
CACAGCAATG ACTCGTCTAT CTCGAGCAAC GGAGACTGCT CCACCAACGA CATCAAGTTG
CAATTTGTCG CTTCTGACGA AATGGAAAAA AAGTTACCTG TTTTCAACAC CTTCAATGAG
ACGGAACGAG AGGGCGCCGC CTTTGCCAAT CAAGGGATGA ACAAGGATGT TTCGCTGATC
ATGGCTGCTG GTGACTCAGC GAAATCATCA GCCAAGCTTT ATGACGATCT TGAGGTGGAG
GAGGCGATTG CCGCGGCGTT TAAAGAATTT GCAAATCCAA AGCTAAACTC AGCATCTATT
TCGCCTATCG CGGCTCAATC GTCAAATAAC CCGTTCAATA TCCATGAAGC ACCTGCTCCG
TGGTCGGGGT CGACTAAATA TGCCATTGAA AATCAATCTG CGGAAGCAAA CGGAATCAGC
TCGAAAGTTG AACCACAAAG ACCGATGGAG AGAGAGCCAA TTCGTGATCG GGACAAATCG
CACATCAAGC AACAAAATTG GTTTTGGTTT GCCAAACATC TGTTTGAAGA CGTTGCAGGA
GATGTCGTCA AAGCTTCTAT TACTTCAACG CCAGGTTTCA AAATAGAAGC AAAAAGTTTA
GAGGTCGCGG ATGAGCCAGT GGTGGTCGAA GAAAGGCGCG CCGAAGTCAA GAAGAGTATT
GCGCATCTAC CTGCTGTGAC TTTGTCGATC AAAACCAAAG CAGGAAGCGA AGGGCTAGGA
GACTCCGGTG GCCCCAATCA GTGCAACACT CGTCTGCCTT TTCTTGAGAT GCTTACAGGA
CTTGGTAGTT GTATGTCCGA CATTTTGGGG GCCGTTCAAG AAACTCCGGA ACTCGCTCAT
GTCAAATGCC AAGACGACGG TAGATTCCCA TTGCATACTC TCTGCAATAG AGACATTATT
GATCGTTCAT CGGTTGCTGA ATCACCACTG GCAGGTGTTT TGCTGGCCGA CATCTTGGAG
TACAAAGAGG TCCTTAGGAA CCTGTTGGAA GCCTACCCTG CGGCAGCGAC TGTTATGGAC
AAGACCGGCG ACCTACCAGT GCATTTGCTT GCCAGGACGC TCATGAAATG GGAAGCCTAC
TGGTATACAA CTGTTTACGC TCAAGCTGCG AAAGTCTTCA ATCCCGATGG AAAAGATGCT
AACGCAATCT CGTCGTTGTA TCATACGATG TCGACATGTG TTGAACTCGT TCTAGAACCC
CTGGTTACAA AAGAGGATTT GTGTCGCCAA CCAGGTAGTG TTGGTAGAAT GTTTCCATTG
CATATCGCAT CTATATTTAC ATGTTCAGTC GAATCACTCC AATCACTCCT CGAAGCATAC
CCGAATGCAG CAAAAAAAAG GTGTGATCTC AACACCCTCA ATACCTTTAC CCCCGACGAT
TCTTTTCCTT TAATTTTGCA TGATTCGCTT TCAACAGACT TTCCAAAATG GGAGGTTGAA
ATCTTCAAGC AAAATGAATC TTATGTGGCA GGCCTTGGTT GCCACAAGTA CGGTGATGAT
ACCGAGAGGT ACCTCCGCCG ATCGGACCTG CTCTTCGCCT ACAACCCAAC CATTGAGCCA
TATAGGCTTG ATGGCGAACG CATAAGACGT CTCGAAAGAA AAATAATTTT TGAAGCAATT
CAAGTCGTCG AAGGGAAAGA AGACTGCCTT AGCAAAGCCA TGCAGCGAAT TTGGGTATGG
CTCTGTACAT TCAAAGAACA TGGAAGCAAG CGACCCACTT ACAGTCAAAG CGTGAAGAGA
ATCGCAAGAA TGTTAACGCT TCGTGCTGTT CAATATCTAG CCTCAATCTC AACTCCACAT
GGAAAATTAG TCTTGGACGA GGCTACTCCT GAATGTTCAA GAGTCATTCA ACTCCGGCTT
GCAGAAAGCC AACCCATTGA CCTATGGGGA AAAAGGGTTC CACAATCTCG TCGTTTGACG
AAGCAAAATG TGAGGCAATT TGTAAAAAAG ATCTTCAATG TTGAGCAGCA GCGCTTCCCT
ACGAGCTTCA TTGTACTACC GTATCGTCTG CAGGTGAATA AAGACGGTTT TAACAGCATT
GGAACACCAG AAGCGATCGA GGTTGCGGAC TTATTCACCA GTTATATGCT ACGTCTGACA
GATCCAAGAG CTCTTCTTCA CTATCTTAAC GTAAAATCAC AGAAACACTA TGGTGAACCA
CTTATCCAGG GAAGCAAGAC GGATGAGGCC CGACAAAATT TTCTCGATTC AATCAAGAGA
GTAGAAGACA ATATGCTTTC TCTATACAAA CCAGGATCGT CGTTTTTATA TCTTCTAGAT
GAAGGAACTG GCTTTCCAGT AGTTCCAGGG AGCACTGACG AGTACCCAAT CATCCTCGCT
GAACCTATGA GCATCATTCC CAAAATATTC CCGCTGATGA TGCCTGGATT GGTCATGATG
CGAGGCGAAC AGTATCTAAT CACATTGTCG AAGGTCCTCC TCGACAGCGA CGTAACGATG
GTACCACGAA ACTGGTTGAC GACTACAGAT AATATCGAAA GAAGGCTATT ATCCGCTGAG
GTTGCGGATT TGACTGACAG TGAAGCGTCG ACATTAGGTG ATCGTATATC TCAGCTTTCG
TCTAGCAACA AGACTCGATG GGAGGGGATT ATGTCACCCA AGAATGGAAA TACTGAATGG
GCTGCGGAAA TGTCTATTCT CAACACTCTG ATGGAAGTAA ACGACCCATC GATGAAGTTT
GCTGGTCTCA AAGTTCAACG TGACGATGAT TCGTCTTTGT TTTGGTCTGT GGACTCAAAC
AATGATTGCT GTAATTCGAC TCTTGCGCTA GGAGCATTGC ACATTGATGA CCTCTCCAAT
AAACAAAAAG AATTGGCCAA AAAGCTGGAA CGCATGAGAG TCGACAGGAA AGATTCGGGT
CCAGATTTTC GATACCCTAG AAAGAACTTC GTTGAGCCAC ATAACGAGAT GCTTAACAAA
CCATTTTGGC AAAGGCTAGC TAACGCTTGC GACTACGTCA AATATCCTGA CAAAGCAGTA
GACTCAGAAA GAAAAAAGCT TCCCTTGAAA ATTGCTATTG ACTGTAAATC AAAATTGGAT
TCTGAAATTT CCTCAGATGA TATGAAAGGG GAGATCCGAA AGAAGTACAG CTTTCTTTTA
TCCGACTTGG CAGTTAAGGA TCGCGATAAT AAGGGACAAG AAGCCTTCTG CTGTCGACAA
CGAGAACGAG GTTCGAGTAG TGAAAGAATT TGGGAGGATG TGACTTCGGA ATTAGACCGT
GCTGGAATGT TTTACGAGGA GAGTGCAATC TTGCACCTGA AAGTCGGCAT TGCTGAAGAA
GCAAAACGAA GCGGGCTTCT CGCCAAGCGA ATCGCTTCGC TCCAGGAAGG CGGGGCTCAT
GTATGTTTTA AGGCGGAAGC ACTAGACACG GAGCTGCCAT ATCACGAAAT TCAAAACGAA
GTGACTGTCC TTCCAGGACT TTCTGATTCC AGGAAATTGT TGATTAGGCT GTTCGACTTG
GAGGACCGTT TGTTGTGTGA CGAGATTGAT ATTCAGCATC TCGCAATTGA GTCCCTTTCT
ATGTTTTACC AGATTGAAGA GGTCGACCCC GACAATCTGT TTGAAGAAAC GAAAGAAGAA
TTCAATAGCC GCGAGAGCGT TTTACATCGT GCACATCCTC GTGTACACTC TGCTTCTTTT
AGAGCAGATG CGAGAGGATT TTGTGGTGAG AAAACGCCTA GTCTAGCCAC GTCGTTGTCT
AATGACCCTG GAAGTTTCGT CAACCCTCTT GACCTGACGA ATCTGAATGA TAATGTAATG
GAAGACATCG CAGTGCCGTG GGTTGTGTAT CACGAATCGA CTGGCCAAAT TGAGTTCTGA
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| Protein sequence | MTKKPSFSVD ICATCITSKA PPLPLREELP SLGFEIVYNA GGLGAKASKH ETKIALDQYR
KQCQTKELKK RRFFPKSSRR IRETLLERKK IEHQLKIPHA LSYAAYEHRL ARLEEKSWTS
TSTSFTPTTH ASSHKSISLY KYKDGKKPFT KRCKGRWGIS LRRRIGSNRK KDTKSLPSET
SEFLQTSSIR DTIGKAAFGD FLVPVNSSSH EKENGVDCGM YTKRNPLKWK RAFDSESFDS
HSNDSSISSN GDCSTNDIKL QFVASDEMEK KLPVFNTFNE TEREGAAFAN QGMNKDVSLI
MAAGDSAKSS AKLYDDLEVE EAIAAAFKEF ANPKLNSASI SPIAAQSSNN PFNIHEAPAP
WSGSTKYAIE NQSAEANGIS SKVEPQRPME REPIRDRDKS HIKQQNWFWF AKHLFEDVAG
DVVKASITST PGFKIEAKSL EVADEPVVVE ERRAEVKKSI AHLPAVTLSI KTKAGSEGLG
DSGGPNQCNT RLPFLEMLTG LGSCMSDILG AVQETPELAH VKCQDDGRFP LHTLCNRDII
DRSSVAESPL AGVLLADILE YKEVLRNLLE AYPAAATVMD KTGDLPVHLL ARTLMKWEAY
WYTTVYAQAA KVFNPDGKDA NAISSLYHTM STCVELVLEP LVTKEDLCRQ PGSVGRMFPL
HIASIFTCSV ESLQSLLEAY PNAAKKRCDL NTLNTFTPDD SFPLILHDSL STDFPKWEVE
IFKQNESYVA GLGCHKYGDD TERYLRRSDL LFAYNPTIEP YRLDGERIRR LERKIIFEAI
QVVEGKEDCL SKAMQRIWVW LCTFKEHGSK RPTYSQSVKR IARMLTLRAV QYLASISTPH
GKLVLDEATP ECSRVIQLRL AESQPIDLWG KRVPQSRRLT KQNVRQFVKK IFNVEQQRFP
TSFIVLPYRL QVNKDGFNSI GTPEAIEVAD LFTSYMLRLT DPRALLHYLN VKSQKHYGEP
LIQGSKTDEA RQNFLDSIKR VEDNMLSLYK PGSSFLYLLD EGTGFPVVPG STDEYPIILA
EPMSIIPKIF PLMMPGLVMM RGEQYLITLS KVLLDSDVTM VPRNWLTTTD NIERRLLSAE
VADLTDSEAS TLGDRISQLS SSNKTRWEGI MSPKNGNTEW AAEMSILNTL MEVNDPSMKF
AGLKVQRDDD SSLFWSVDSN NDCCNSTLAL GALHIDDLSN KQKELAKKLE RMRVDRKDSG
PDFRYPRKNF VEPHNEMLNK PFWQRLANAC DYVKYPDKAV DSERKKLPLK IAIDCKSKLD
SEISSDDMKG EIRKKYSFLL SDLAVKDRDN KGQEAFCCRQ RERGSSSERI WEDVTSELDR
AGMFYEESAI LHLKVGIAEE AKRSGLLAKR IASLQEGGAH VCFKAEALDT ELPYHEIQNE
VTVLPGLSDS RKLLIRLFDL EDRLLCDEID IQHLAIESLS MFYQIEEVDP DNLFEETKEE
FNSRESVLHR AHPRVHSASF RADARGFCGE KTPSLATSLS NDPGSFVNPL DLTNLNDNVM
EDIAVPWVVY HESTGQIEF
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